Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC097468.3-201ENST00000607956 456 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.19□□□□□ -1.74
USP38Q8NB14 AL591424.2-201ENST00000617023 128 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 AL445264.1-201ENST00000621719 171 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 AC243312.2-201ENST00000623340 601 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.19□□□□□ -1.74
USP38Q8NB14 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.19□□□□□ -1.74
USP38Q8NB14 AC127502.3-201ENST00000636170 1206 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 CRYM-AS1-204ENST00000637983 556 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
USP38Q8NB14 CR383658.2-201ENST00000547576 1525 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
USP38Q8NB14 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.19□□□□□ -1.74
USP38Q8NB14 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP38Q8NB14 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.18□□□□□ -1.74
USP38Q8NB14 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.18□□□□□ -1.74
USP38Q8NB14 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.18□□□□□ -1.74
USP38Q8NB14 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.18□□□□□ -1.74
USP38Q8NB14 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.18□□□□□ -1.74
USP38Q8NB14 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.18□□□□□ -1.74
USP38Q8NB14 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.18□□□□□ -1.74
USP38Q8NB14 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.18□□□□□ -1.74
USP38Q8NB14 RPL23AP39-201ENST00000415533 405 ntBASIC4.18□□□□□ -1.74
USP38Q8NB14 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.18□□□□□ -1.74
USP38Q8NB14 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.18□□□□□ -1.74
USP38Q8NB14 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.18□□□□□ -1.74
USP38Q8NB14 AC006548.1-201ENST00000427470 102 ntBASIC4.18□□□□□ -1.74
USP38Q8NB14 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.18□□□□□ -1.74
USP38Q8NB14 MTCO1P27-201ENST00000448269 226 ntBASIC4.18□□□□□ -1.74
USP38Q8NB14 snoU13.8-201ENST00000458890 104 ntBASIC4.18□□□□□ -1.74
USP38Q8NB14 snoU13.3-201ENST00000459441 104 ntBASIC4.18□□□□□ -1.74
USP38Q8NB14 AC093809.1-201ENST00000509155 340 ntBASIC4.18□□□□□ -1.74
USP38Q8NB14 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.18□□□□□ -1.74
USP38Q8NB14 AC093677.1-201ENST00000514414 678 ntBASIC4.18□□□□□ -1.74
USP38Q8NB14 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.18□□□□□ -1.74
USP38Q8NB14 AL121766.1-201ENST00000547436 487 ntBASIC4.18□□□□□ -1.74
USP38Q8NB14 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.18□□□□□ -1.74
USP38Q8NB14 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.18□□□□□ -1.74
USP38Q8NB14 AC090615.1-201ENST00000577519 154 ntBASIC4.18□□□□□ -1.74
USP38Q8NB14 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.18□□□□□ -1.74
USP38Q8NB14 AC010620.1-201ENST00000601088 1102 ntBASIC4.18□□□□□ -1.74
USP38Q8NB14 AC007687.1-201ENST00000602704 304 ntBASIC4.18□□□□□ -1.74
USP38Q8NB14 CR381572.1-201ENST00000625098 102 ntBASIC4.18□□□□□ -1.74
USP38Q8NB14 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.18□□□□□ -1.74
USP38Q8NB14 AC138649.5-201ENST00000637456 137 ntBASIC4.18□□□□□ -1.74
USP38Q8NB14 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USP38Q8NB14 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.18□□□□□ -1.74
USP38Q8NB14 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.18□□□□□ -1.74
USP38Q8NB14 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP38Q8NB14 USP8P1-201ENST00000494673 3183 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
USP38Q8NB14 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP38Q8NB14 RNU6-500P-201ENST00000362349 107 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 SNORD51-201ENST00000384320 80 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 AL031121.1-201ENST00000406553 254 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.17□□□□□ -1.74
USP38Q8NB14 TPMTP3-201ENST00000411928 735 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 RPL7P8-201ENST00000411964 730 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 AMD1P2-201ENST00000412936 992 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.17□□□□□ -1.74
USP38Q8NB14 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.17□□□□□ -1.74
USP38Q8NB14 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.17□□□□□ -1.74
USP38Q8NB14 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.17□□□□□ -1.74
USP38Q8NB14 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.17□□□□□ -1.74
USP38Q8NB14 MTND1P30-201ENST00000441241 901 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.17□□□□□ -1.74
USP38Q8NB14 RPL36AP33-201ENST00000450395 310 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 SNORD105B-201ENST00000458770 79 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.17□□□□□ -1.74
USP38Q8NB14 ST13P14-201ENST00000474095 734 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 AC104563.1-201ENST00000476147 376 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 AC106872.3-201ENST00000495104 446 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.17□□□□□ -1.74
USP38Q8NB14 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.17□□□□□ -1.74
USP38Q8NB14 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
USP38Q8NB14 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.17□□□□□ -1.74
USP38Q8NB14 OR5AP1P-201ENST00000529730 940 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.17□□□□□ -1.74
USP38Q8NB14 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.17□□□□□ -1.74
USP38Q8NB14 AC023161.2-201ENST00000551218 780 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 AC126177.3-201ENST00000551839 688 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.17□□□□□ -1.74
USP38Q8NB14 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.17□□□□□ -1.74
USP38Q8NB14 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.17□□□□□ -1.74
USP38Q8NB14 ROCK1P1-201ENST00000573767 549 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 AC011260.1-201ENST00000578420 472 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 AC090616.5-202ENST00000582111 297 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.17□□□□□ -1.74
USP38Q8NB14 WISP1-OT1-201ENST00000602893 642 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 AC055876.5-201ENST00000605667 259 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 RNU1-30P-201ENST00000606575 163 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 AC106028.5-201ENST00000610332 395 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 MIR6715A-201ENST00000615929 79 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 AC244258.1-201ENST00000637553 1071 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.17□□□□□ -1.74
USP38Q8NB14 AL049781.1-201ENST00000623195 3585 ntBASIC4.17□□□□□ -1.74
USP38Q8NB14 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms