Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.81□□□□□ -1.96
CDKL3Q8IVW4 AL512637.2-201ENST00000431287 1256 ntBASIC2.81□□□□□ -1.96
CDKL3Q8IVW4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.81□□□□□ -1.96
CDKL3Q8IVW4 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.81□□□□□ -1.96
CDKL3Q8IVW4 AL096829.2-201ENST00000446582 742 ntBASIC2.81□□□□□ -1.96
CDKL3Q8IVW4 NANOGNBP1-201ENST00000448444 480 ntBASIC2.81□□□□□ -1.96
CDKL3Q8IVW4 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.81□□□□□ -1.96
CDKL3Q8IVW4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.81□□□□□ -1.96
CDKL3Q8IVW4 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.81□□□□□ -1.96
CDKL3Q8IVW4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.81□□□□□ -1.96
CDKL3Q8IVW4 OR4R2P-201ENST00000530815 597 ntBASIC2.81□□□□□ -1.96
CDKL3Q8IVW4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.81□□□□□ -1.96
CDKL3Q8IVW4 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.81□□□□□ -1.96
CDKL3Q8IVW4 MIR4789-201ENST00000577469 82 ntBASIC2.81□□□□□ -1.96
CDKL3Q8IVW4 AC133794.1-201ENST00000602731 914 ntBASIC2.81□□□□□ -1.96
CDKL3Q8IVW4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.81□□□□□ -1.96
CDKL3Q8IVW4 AL158211.2-201ENST00000607282 395 ntBASIC2.81□□□□□ -1.96
CDKL3Q8IVW4 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CDKL3Q8IVW4 MIR6733-201ENST00000635723 61 ntBASIC2.81□□□□□ -1.96
CDKL3Q8IVW4 AL590396.4-201ENST00000636779 956 ntBASIC2.81□□□□□ -1.96
CDKL3Q8IVW4 AC099654.7-201ENST00000635788 2127 ntBASIC2.81□□□□□ -1.96
CDKL3Q8IVW4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CDKL3Q8IVW4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 SGO1P2-201ENST00000429458 1589 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 RNU6-932P-201ENST00000391108 106 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 RPL22P22-201ENST00000395439 379 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 FNDC3CP-201ENST00000420795 1155 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 FO393414.1-201ENST00000428697 1184 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 AC002542.1-201ENST00000440683 193 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 OR51B8P-201ENST00000449892 769 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 AC104073.1-201ENST00000451988 151 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 CDC42P1-201ENST00000456658 548 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 RPS27AP9-201ENST00000477681 438 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 NIFKP8-201ENST00000560500 874 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 AC087481.2-201ENST00000565492 330 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 RPL23AP78-201ENST00000599928 470 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 AL020997.3-201ENST00000602843 359 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 XIAPP1-201ENST00000603162 600 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 AP002906.1-201ENST00000603405 233 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 AC093732.2-201ENST00000607950 274 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 AL359198.2-201ENST00000611836 194 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 AC084824.5-201ENST00000612009 413 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 AL355810.1-201ENST00000614629 552 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 AL360181.4-201ENST00000621752 134 ntBASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.8□□□□□ -1.96
CDKL3Q8IVW4 AC011460.1-201ENST00000636268 1834 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 RNU6-1249P-201ENST00000363237 111 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 Y_RNA.111-201ENST00000363248 100 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 SNORA18.3-201ENST00000384122 132 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 U6.112-201ENST00000384129 70 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 MIR592-201ENST00000384959 97 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 AL138827.1-201ENST00000402666 306 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 FAT1P1-201ENST00000406588 507 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 OR51A3P-201ENST00000413596 924 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 OR4K6P-201ENST00000416478 897 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 LSM1P1-201ENST00000438629 273 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 AL590664.1-201ENST00000448065 339 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 RNU7-140P-201ENST00000459546 60 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 NAP1L1P3-201ENST00000462291 880 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 RPL9P33-201ENST00000484311 566 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 AIG1P1-201ENST00000503376 148 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 ELOCP31-201ENST00000540463 467 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 AC128657.1-201ENST00000549459 145 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 MTND4LP25-201ENST00000570218 163 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 MTCO1P40-201ENST00000574371 625 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 MTCO3P13-201ENST00000577757 781 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 BPTFP1-201ENST00000579209 492 ntBASIC2.79□□□□□ -1.96
CDKL3Q8IVW4 AC138761.3-201ENST00000579993 334 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms