Protein–RNA interactions for Protein: Q86VZ5

SGMS1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1Q86VZ5 SNORD35B-201ENST00000363660 87 ntBASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 RNY3P3-201ENST00000363816 102 ntBASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 AC133104.1-201ENST00000429100 218 ntBASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 SNRPGP6-201ENST00000451124 220 ntBASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 RPS20P20-201ENST00000460498 340 ntBASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 RPL31P61-201ENST00000496160 376 ntBASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 AC025445.1-201ENST00000502728 300 ntBASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 AC034159.1-201ENST00000513885 583 ntBASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 RN7SKP21-201ENST00000516503 220 ntBASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 AC093027.1-201ENST00000546698 429 ntBASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 AC007424.1-203ENST00000554613 687 ntBASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 SNORD39.3-201ENST00000584451 71 ntBASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 TPMTP1-201ENST00000592307 737 ntBASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 AC015813.4-201ENST00000610469 179 ntBASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 AL773545.4-201ENST00000637262 310 ntBASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 AL513478.4-201ENST00000641636 310 ntBASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SGMS1Q86VZ5 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.65
SGMS1Q86VZ5 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SGMS1Q86VZ5 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 RNU6-845P-201ENST00000362578 103 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 RNU6-451P-201ENST00000362921 107 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 SNORD81.2-201ENST00000365153 76 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 RNU6-359P-201ENST00000365466 108 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 Y_RNA.381-201ENST00000365666 102 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 RNU6-1227P-201ENST00000383981 107 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 HMGB1P17-201ENST00000403495 628 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 SNORA3C-201ENST00000408792 125 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 AL160275.2-201ENST00000412010 394 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 SNRPEP10-201ENST00000420249 274 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 AC011742.1-201ENST00000431448 434 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 AC010881.1-201ENST00000433830 235 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 TAAR7P-201ENST00000436141 242 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 SNRPEP7-201ENST00000438350 220 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 AC083863.1-201ENST00000438811 231 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 TMEM251P1-201ENST00000503717 318 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 OR4A12P-201ENST00000530847 918 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 YPEL5P3-201ENST00000547227 352 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 AC068790.5-201ENST00000602741 355 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 NRBF2P5-201ENST00000603087 788 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 AL162413.1-201ENST00000603198 110 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 AL451044.1-201ENST00000604867 238 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 AL136363.1-201ENST00000605349 337 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 AC009237.17-201ENST00000618111 748 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 AC068722.2-201ENST00000618734 544 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 CDRT1-208ENST00000630868 794 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 MAPK10-253ENST00000641010 4072 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 AC000123.3-201ENST00000624029 4975 ntBASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SGMS1Q86VZ5 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms