Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 AC004853.1-201ENST00000604902 698 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 AC106900.2-201ENST00000604994 317 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 AC097655.1-201ENST00000635075 318 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 ZNF826P-207ENST00000622273 1910 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AL161781.1-201ENST00000354277 403 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 MIR423-201ENST00000362201 94 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 RNU6-433P-201ENST00000363216 104 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 RNU6-289P-201ENST00000364093 107 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 Y_RNA.302-201ENST00000364997 102 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 RNU6-882P-201ENST00000391025 103 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 SNORA48.8-201ENST00000391324 134 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 SAR1AP2-201ENST00000392696 594 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 BEND7P1-201ENST00000422058 457 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 MTND1P20-201ENST00000430341 950 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 GOT2P5-201ENST00000433995 546 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 MTND1P26-201ENST00000440488 538 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AC140076.1-201ENST00000449897 361 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 NANOGP10-201ENST00000453325 895 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AC104308.1-201ENST00000454621 333 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AL672167.3-201ENST00000465951 960 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AC006483.1-201ENST00000487308 313 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 VN1R104P-201ENST00000505115 1009 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AC010486.2-201ENST00000505572 483 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AC087276.1-201ENST00000529659 480 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 OR4T1P-201ENST00000554933 911 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AC090616.2-202ENST00000584248 222 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 CLIC4P2-201ENST00000601934 717 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AC025811.1-201ENST00000604312 472 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AC072039.2-201ENST00000608883 439 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 TUG1_1.1-201ENST00000610654 145 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AC004223.4-201ENST00000612426 332 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AL138880.2-201ENST00000616214 239 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AC079248.2-201ENST00000623779 326 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AL356596.1-201ENST00000624230 379 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AC007671.2-201ENST00000637344 619 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 AL161912.2-201ENST00000565707 3007 ntBASIC3.49□□□□□ -1.85
NUP54Q7Z3B4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 RNU6-777P-201ENST00000364265 104 ntBASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 MIR320C1-201ENST00000408566 88 ntBASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 MIR1290-201ENST00000408735 78 ntBASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 U3.42-201ENST00000408746 214 ntBASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 RN7SKP266-201ENST00000410232 287 ntBASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 RNU4-72P-201ENST00000410754 173 ntBASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 RPL23AP39-201ENST00000415533 405 ntBASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 AL139247.1-201ENST00000422768 325 ntBASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 AL365203.2-201ENST00000423444 196 ntBASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 snoU13.8-201ENST00000458890 104 ntBASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 SCARNA14-201ENST00000516903 136 ntBASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 MTND2P38-201ENST00000522536 667 ntBASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 FAM60DP-201ENST00000524174 632 ntBASIC3.48□□□□□ -1.85
NUP54Q7Z3B4 OR5AP1P-201ENST00000529730 940 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms