Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 AP003102.1-201ENST00000525638 661 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 OR4R2P-201ENST00000530815 597 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 AC079600.2-201ENST00000550076 130 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 GLUD1P4-201ENST00000590914 418 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 AC010620.2-201ENST00000600135 313 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 U73023.1-201ENST00000603134 700 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 AC024560.3-201ENST00000608482 349 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 AC092574.1-201ENST00000609771 420 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 RMST_10.1-201ENST00000616309 154 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 AC097372.4-201ENST00000625025 466 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 FO624990.1-201ENST00000636373 85 ntBASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.34□□□□□ -2.03
SMARCD3Q6STE5 AC099654.7-201ENST00000635788 2127 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 MTND5P11-201ENST00000511037 1812 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 MIR16-2-201ENST00000362117 81 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 RNU6-543P-201ENST00000362576 108 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 SNORA48.2-201ENST00000390926 124 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 ANAPC10P1-201ENST00000395991 556 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 ARF4P3-201ENST00000397387 509 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 AC092447.6-201ENST00000414578 210 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 RPL21P32-201ENST00000419877 477 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 UBE2D3P3-201ENST00000426992 425 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 MTCYBP34-201ENST00000439552 670 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 AL049829.1-201ENST00000465411 156 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 AC133134.1-201ENST00000466800 359 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 RNF138P1-201ENST00000502765 546 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 MTCO3P44-201ENST00000510977 541 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 RNA5SP282-201ENST00000516355 108 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 MTND1P36-201ENST00000522384 936 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 AC104229.1-201ENST00000561364 255 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 AC090312.2-201ENST00000582687 378 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 AC008739.2-201ENST00000597006 317 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 AC026741.1-201ENST00000605892 482 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 AC135507.2-201ENST00000612443 309 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 MIR8084-201ENST00000614105 89 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 AC018926.3-201ENST00000618841 406 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 AL356118.1-201ENST00000635272 1078 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.33□□□□□ -2.04
SMARCD3Q6STE5 ZNF734P-201ENST00000419494 1534 ntBASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 SGO1P2-201ENST00000429458 1589 ntBASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 RNA5SP258-201ENST00000362750 119 ntBASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 HMGB3P31-201ENST00000413333 595 ntBASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 RPL7P37-201ENST00000425095 738 ntBASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 UBE2V1P5-201ENST00000440070 405 ntBASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 SETP6-201ENST00000479329 568 ntBASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 RNU6-202P-201ENST00000515998 96 ntBASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 RNA5SP367-201ENST00000516557 118 ntBASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 RNU6-334P-201ENST00000517072 102 ntBASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 RN7SKP40-201ENST00000517211 242 ntBASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 OR5BN1P-201ENST00000532955 829 ntBASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 AP000916.1-201ENST00000533869 835 ntBASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 AC092470.1-201ENST00000546187 132 ntBASIC2.32□□□□□ -2.04
SMARCD3Q6STE5 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms