Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC023598.1-201ENST00000472521 361 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 AC008628.2-201ENST00000502605 298 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 FTH1P21-201ENST00000512179 511 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 RNU6-875P-201ENST00000516488 106 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 RNA5SP143-201ENST00000516936 115 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 MIR4637-201ENST00000582405 84 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 HMGN1P30-201ENST00000589286 268 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 VN1R84P-201ENST00000593697 235 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 AC090948.2-201ENST00000607363 564 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 AL590282.1-201ENST00000610379 1136 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 AC063943.3-201ENST00000615562 356 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 PISRT1-201ENST00000626175 531 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 LRRC77P-213ENST00000637727 880 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 CASC19-280ENST00000642102 1351 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.84□□□□□ -1.8
ZNF549Q6P9A3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
ZNF549Q6P9A3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.84□□□□□ -1.8
ZNF549Q6P9A3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
ZNF549Q6P9A3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
ZNF549Q6P9A3 AL118496.1-201ENST00000440201 1812 ntBASIC3.84□□□□□ -1.8
ZNF549Q6P9A3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC011155.1-201ENST00000316512 456 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 Y_RNA.11-201ENST00000362375 109 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 MIR199A2-201ENST00000385289 110 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 RNU6-195P-201ENST00000411352 109 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC012498.1-201ENST00000424037 437 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC092017.2-201ENST00000427600 362 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 ELOCP14-201ENST00000428070 331 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 ELOCP7-201ENST00000439968 331 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 MTND5P14-201ENST00000441481 1267 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 RPL21P133-201ENST00000443666 476 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC017015.1-201ENST00000477387 286 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC084198.1-201ENST00000477747 402 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 PPIAP15-201ENST00000479662 484 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC068587.1-201ENST00000483613 781 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC110792.1-201ENST00000491826 472 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC106872.3-201ENST00000495104 446 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 TMEM251P1-201ENST00000503717 318 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC022447.3-201ENST00000506865 495 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC046134.1-201ENST00000514454 666 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC104986.1-201ENST00000517978 436 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 NARSP2-201ENST00000518524 679 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 OR4A12P-201ENST00000530847 918 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AL157687.1-201ENST00000554853 619 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 LARP7P2-201ENST00000575306 125 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC008752.3-201ENST00000588113 712 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AL049634.3-201ENST00000604968 457 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AL390208.1-201ENST00000605885 644 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AP001330.5-201ENST00000607176 411 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC079684.1-201ENST00000621405 437 ntBASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.83□□□□□ -1.8
ZNF549Q6P9A3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms