Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 MTND5P1-201ENST00000445440 1375 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 MIR422A-201ENST00000362286 90 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 AL024474.1-201ENST00000404655 591 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 AL138885.1-201ENST00000405921 675 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 AL591034.1-201ENST00000407447 340 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 BTF3P8-201ENST00000414577 526 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 MRPL50P2-201ENST00000416821 482 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 BOLA3P4-201ENST00000418151 400 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 AL513175.2-201ENST00000422071 443 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 AL139281.1-201ENST00000422120 335 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 RAC1P8-201ENST00000427086 527 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 YME1L1P1-201ENST00000429435 297 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.17□□□□□ -1.9
ATL3Q6DD88 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.17□□□□□ -1.9
ATL3Q6DD88 YWHAZP7-201ENST00000436906 631 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 AC127537.2-201ENST00000439258 465 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 AC093156.1-201ENST00000440382 670 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 MTCYBP42-201ENST00000444653 1130 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.17□□□□□ -1.9
ATL3Q6DD88 ST13P20-201ENST00000447996 1065 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.17□□□□□ -1.9
ATL3Q6DD88 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.17□□□□□ -1.9
ATL3Q6DD88 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.17□□□□□ -1.9
ATL3Q6DD88 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.17□□□□□ -1.9
ATL3Q6DD88 RN7SL499P-201ENST00000481141 276 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 SUMO2P5-201ENST00000506790 245 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 AC091826.1-201ENST00000514065 313 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 RN7SKP57-201ENST00000517248 293 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.17□□□□□ -1.9
ATL3Q6DD88 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.17□□□□□ -1.9
ATL3Q6DD88 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.17□□□□□ -1.9
ATL3Q6DD88 AP001317.1-201ENST00000531194 960 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.17□□□□□ -1.9
ATL3Q6DD88 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.17□□□□□ -1.9
ATL3Q6DD88 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.17□□□□□ -1.9
ATL3Q6DD88 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.17□□□□□ -1.9
ATL3Q6DD88 SULT1C2P1-202ENST00000562418 459 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 MIR4429-201ENST00000580105 73 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 MIR3944-201ENST00000581277 108 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.17□□□□□ -1.9
ATL3Q6DD88 AC078899.3-201ENST00000599065 212 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 BDH2P1-201ENST00000602288 736 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 XIAPP1-201ENST00000603162 600 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.17□□□□□ -1.9
ATL3Q6DD88 AL583856.2-201ENST00000606298 543 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 AL110115.1-201ENST00000614396 364 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 AC009318.4-201ENST00000620496 486 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 AC006111.3-201ENST00000622137 383 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 AC090617.7-201ENST00000623952 126 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.17□□□□□ -1.9
ATL3Q6DD88 AC026634.1-201ENST00000634369 198 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.17□□□□□ -1.9
ATL3Q6DD88 GDI2P1-201ENST00000429312 1336 ntBASIC3.17□□□□□ -1.9
ATL3Q6DD88 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
ATL3Q6DD88 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ATL3Q6DD88 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ATL3Q6DD88 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ATL3Q6DD88 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ATL3Q6DD88 RNA5SP374-201ENST00000362939 125 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 RNU6-298P-201ENST00000390888 96 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 AL079342.2-201ENST00000403367 482 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 AL133264.1-201ENST00000407157 562 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.16□□□□□ -1.9
ATL3Q6DD88 AL136133.1-201ENST00000413694 376 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 LUZP4P1-201ENST00000415420 344 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.16□□□□□ -1.9
ATL3Q6DD88 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.16□□□□□ -1.9
ATL3Q6DD88 C1DP1-201ENST00000426049 402 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 AL035410.1-201ENST00000427409 427 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 AL512649.1-201ENST00000428997 581 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 RPL39P40-201ENST00000445481 146 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.16□□□□□ -1.9
ATL3Q6DD88 MTND2P19-201ENST00000449129 1012 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.16□□□□□ -1.9
ATL3Q6DD88 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.16□□□□□ -1.9
ATL3Q6DD88 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ATL3Q6DD88 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.16□□□□□ -1.9
ATL3Q6DD88 ARL4AP2-201ENST00000507378 601 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ATL3Q6DD88 RNU6-1028P-201ENST00000517164 93 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.16□□□□□ -1.9
ATL3Q6DD88 NDUFS5P6-201ENST00000529136 295 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 DEFB130C-202ENST00000530001 230 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.16□□□□□ -1.9
ATL3Q6DD88 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.16□□□□□ -1.9
ATL3Q6DD88 AC087481.2-201ENST00000565492 330 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.16□□□□□ -1.9
ATL3Q6DD88 AC010653.1-201ENST00000571108 881 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.16□□□□□ -1.9
ATL3Q6DD88 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.16□□□□□ -1.9
ATL3Q6DD88 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.16□□□□□ -1.9
ATL3Q6DD88 AP001542.2-201ENST00000593141 364 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 AL606834.3-201ENST00000602615 496 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 AL159169.3-201ENST00000608871 561 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 AL355810.1-201ENST00000614629 552 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 AP003476.1-201ENST00000623984 516 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 MFSD8-245ENST00000641743 948 ntBASIC3.16□□□□□ -1.9
ATL3Q6DD88 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATL3Q6DD88 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.16□□□□□ -1.9
ATL3Q6DD88 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms