Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 AC100821.1-201ENST00000523153 2479 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 SNORA64.1-201ENST00000362600 132 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 RNU6-249P-201ENST00000363016 102 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 Y_RNA.127-201ENST00000363386 109 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 Y_RNA.215-201ENST00000364204 112 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 RN7SKP186-201ENST00000365371 303 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 U8.8-201ENST00000365399 135 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 RNU6-933P-201ENST00000384424 107 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 RNU6-225P-201ENST00000384613 103 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 AL109941.1-201ENST00000401925 229 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 Y_RNA.590-201ENST00000410140 107 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 RN7SKP159-201ENST00000410657 292 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 RNU2-61P-201ENST00000411069 191 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 RNU6-325P-201ENST00000411132 105 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 RN7SKP293-201ENST00000411389 296 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 AC234779.1-201ENST00000425910 285 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 AC006946.1-201ENST00000429106 328 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 HSPE1P25-201ENST00000455484 251 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 RPL37P6-202ENST00000464216 403 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 RPS23P6-201ENST00000466136 431 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 AL136126.1-201ENST00000473603 402 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 HMGN2P13-201ENST00000476476 274 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 RNA5SP362-201ENST00000516048 118 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 Y_RNA.679-201ENST00000516416 91 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 AC087369.1-201ENST00000520775 996 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 AC022404.1-201ENST00000555320 273 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 AC091078.2-201ENST00000557145 559 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 AC007494.1-201ENST00000562293 760 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 AC233702.2-202ENST00000562547 291 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 AC010547.6-201ENST00000571789 193 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 AC007448.1-201ENST00000582714 234 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 AC068790.4-201ENST00000602474 263 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 AC007566.2-201ENST00000603642 413 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 AC093849.1-201ENST00000563631 2209 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 DOCK11P1-201ENST00000553480 5932 ntBASIC5.35□□□□□ -1.55
RNFT1Q5M7Z0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 Y_RNA.82-201ENST00000363000 102 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 Y_RNA.92-201ENST00000363043 102 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 Y_RNA.235-201ENST00000364412 102 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 Y_RNA.306-201ENST00000365015 102 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 Y_RNA.312-201ENST00000365089 102 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 Y_RNA.322-201ENST00000365151 102 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 SNORD73A-201ENST00000386062 65 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 AL513475.1-201ENST00000406602 315 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 RNU6-257P-201ENST00000410238 98 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 RNU5E-9P-201ENST00000411164 104 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 RNU6-516P-201ENST00000411381 104 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 AL358176.3-201ENST00000420757 454 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 AL662874.1-201ENST00000426065 230 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 AC099677.3-201ENST00000427081 395 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 OR6D1P-201ENST00000436165 939 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 Y_RNA.650-201ENST00000459002 102 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 RPS26P39-201ENST00000469206 341 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 AC022034.3-201ENST00000471393 478 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 RN7SL177P-201ENST00000476596 299 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 RPL23AP40-201ENST00000487630 390 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 AL136038.1-201ENST00000497246 351 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 AC097462.2-201ENST00000504623 481 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 AC113155.1-201ENST00000511141 769 ntBASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.34□□□□□ -1.55
RNFT1Q5M7Z0 Y_RNA.777-201ENST00000516982 102 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms