Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 NXPH1-205ENST00000602349 1953 ntBASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 Y_RNA.541-201ENST00000384640 113 ntBASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 BX276092.6-201ENST00000430476 250 ntBASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 AC108734.1-201ENST00000439549 399 ntBASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 AL513124.1-201ENST00000450410 614 ntBASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 BX276092.8-201ENST00000455722 250 ntBASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 AC108078.2-201ENST00000510750 236 ntBASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 TOMM22P4-201ENST00000511318 336 ntBASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 AC126177.3-201ENST00000551839 688 ntBASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 LSM6P2-201ENST00000552208 177 ntBASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 HNRNPCP4-201ENST00000571636 900 ntBASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 MIR132-201ENST00000591554 101 ntBASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 AC007619.2-201ENST00000605743 379 ntBASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 AC009570.1-201ENST00000609599 745 ntBASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 LINC01963-201ENST00000562038 3148 ntBASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 AC009902.3-201ENST00000606235 2172 ntBASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 PRO1804-201ENST00000623780 2050 ntBASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CTC1Q2NKJ3 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 AP001148.1-201ENST00000624124 2359 ntBASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 Y_RNA.233-201ENST00000364407 101 ntBASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 Y_RNA.234-201ENST00000364409 97 ntBASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 RNU6-1325P-201ENST00000364905 105 ntBASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 RNU6-278P-201ENST00000390945 109 ntBASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 AL024474.1-201ENST00000404655 591 ntBASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 RPL23AP36-201ENST00000413895 458 ntBASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 AC093106.2-201ENST00000428212 385 ntBASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 UBE2V1P13-201ENST00000436983 439 ntBASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 AC008267.6-201ENST00000441664 139 ntBASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 CEACAMP9-201ENST00000442990 513 ntBASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 AP000893.1-201ENST00000474462 794 ntBASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 RNA5SP228-201ENST00000516232 133 ntBASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 Y_RNA.687-201ENST00000516558 91 ntBASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 AC139365.2-201ENST00000517972 253 ntBASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 FAM60DP-201ENST00000524174 632 ntBASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 AC009643.1-201ENST00000532030 391 ntBASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 AC136932.1-201ENST00000574771 208 ntBASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 MIR4646-201ENST00000580775 63 ntBASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 COX6CP3-201ENST00000580869 223 ntBASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 RPL7P50-201ENST00000600588 727 ntBASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 AC132068.1-201ENST00000623805 459 ntBASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTC1Q2NKJ3 AC008725.1-201ENST00000605123 2263 ntBASIC6.06□□□□□ -1.44
CTC1Q2NKJ3 SMG1P7-201ENST00000565246 2704 ntBASIC6.06□□□□□ -1.44
CTC1Q2NKJ3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CTC1Q2NKJ3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CTC1Q2NKJ3 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
CTC1Q2NKJ3 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CTC1Q2NKJ3 RNA5SP453-201ENST00000362503 119 ntBASIC6.06□□□□□ -1.44
CTC1Q2NKJ3 Y_RNA.399-201ENST00000383955 105 ntBASIC6.06□□□□□ -1.44
CTC1Q2NKJ3 AL109941.1-201ENST00000401925 229 ntBASIC6.06□□□□□ -1.44
CTC1Q2NKJ3 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.06□□□□□ -1.44
CTC1Q2NKJ3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.06□□□□□ -1.44
CTC1Q2NKJ3 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CTC1Q2NKJ3 AC092017.2-201ENST00000427600 362 ntBASIC6.06□□□□□ -1.44
CTC1Q2NKJ3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.06□□□□□ -1.44
CTC1Q2NKJ3 AP000936.3-201ENST00000438127 255 ntBASIC6.06□□□□□ -1.44
CTC1Q2NKJ3 RAC1P7-201ENST00000445367 377 ntBASIC6.06□□□□□ -1.44
CTC1Q2NKJ3 RPL23AP81-201ENST00000455252 467 ntBASIC6.06□□□□□ -1.44
CTC1Q2NKJ3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC6.06□□□□□ -1.44
CTC1Q2NKJ3 AP000942.1-201ENST00000463969 747 ntBASIC6.06□□□□□ -1.44
CTC1Q2NKJ3 AC018437.1-201ENST00000492214 406 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms