Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 AC010546.1-201ENST00000569391 485 ntBASIC1.9□□□□□ -2.11
HIST1H1AQ02539 ELOCP29-201ENST00000588193 334 ntBASIC1.9□□□□□ -2.11
HIST1H1AQ02539 VN1R90P-201ENST00000595717 726 ntBASIC1.9□□□□□ -2.11
HIST1H1AQ02539 AL355812.1-201ENST00000603215 216 ntBASIC1.9□□□□□ -2.11
HIST1H1AQ02539 AC106900.2-201ENST00000604994 317 ntBASIC1.9□□□□□ -2.11
HIST1H1AQ02539 AC092608.2-201ENST00000624427 218 ntBASIC1.9□□□□□ -2.11
HIST1H1AQ02539 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 AL137003.2-201ENST00000606924 2538 ntBASIC1.9□□□□□ -2.11
HIST1H1AQ02539 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
HIST1H1AQ02539 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AL596028.1-201ENST00000326971 197 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 RPL21P132-201ENST00000331267 462 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 SNORA70.4-201ENST00000365509 134 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 SNORA9-201ENST00000384215 133 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AL139039.1-201ENST00000401900 692 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 MTCO2P17-201ENST00000424336 677 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AC006946.1-201ENST00000429106 328 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AC025750.2-201ENST00000442609 450 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AC104389.3-201ENST00000445629 235 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AC078857.1-201ENST00000469870 667 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 SETP6-201ENST00000479329 568 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 KLRA1P-201ENST00000503499 986 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AC021087.2-201ENST00000504656 1203 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AC034159.1-201ENST00000513885 583 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AC016550.3-201ENST00000515706 767 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AP000889.2-201ENST00000532684 490 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AC018630.1-201ENST00000541376 925 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 MIR3609-201ENST00000582661 80 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 ATP1B3P1-201ENST00000605365 821 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 BNIP3P7-201ENST00000605641 516 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AC112503.2-201ENST00000609005 552 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AP005212.4-201ENST00000614206 710 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AC006386.2-201ENST00000624491 75 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 AC012005.1-201ENST00000624575 75 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 SDAD1P2-201ENST00000441308 2028 ntBASIC1.89□□□□□ -2.11
HIST1H1AQ02539 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.88□□□□□ -2.11
HIST1H1AQ02539 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
HIST1H1AQ02539 MIRLET7G-201ENST00000362280 84 ntBASIC1.88□□□□□ -2.11
HIST1H1AQ02539 RNU6-98P-201ENST00000384173 107 ntBASIC1.88□□□□□ -2.11
HIST1H1AQ02539 RNU6-301P-201ENST00000384277 107 ntBASIC1.88□□□□□ -2.11
HIST1H1AQ02539 MIR493-201ENST00000385254 89 ntBASIC1.88□□□□□ -2.11
HIST1H1AQ02539 DSTNP4-201ENST00000399472 474 ntBASIC1.88□□□□□ -2.11
HIST1H1AQ02539 RPS15AP38-201ENST00000413110 372 ntBASIC1.88□□□□□ -2.11
HIST1H1AQ02539 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.88□□□□□ -2.11
HIST1H1AQ02539 COTL1P1-201ENST00000422309 375 ntBASIC1.88□□□□□ -2.11
HIST1H1AQ02539 AC098826.1-201ENST00000433943 471 ntBASIC1.88□□□□□ -2.11
HIST1H1AQ02539 AC107083.1-201ENST00000439643 279 ntBASIC1.88□□□□□ -2.11
HIST1H1AQ02539 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.88□□□□□ -2.11
HIST1H1AQ02539 COX6CP12-201ENST00000446748 202 ntBASIC1.88□□□□□ -2.11
HIST1H1AQ02539 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.88□□□□□ -2.11
HIST1H1AQ02539 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.88□□□□□ -2.11
HIST1H1AQ02539 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.88□□□□□ -2.11
HIST1H1AQ02539 snoU13.22-201ENST00000459428 104 ntBASIC1.88□□□□□ -2.11
HIST1H1AQ02539 RPL23AP45-201ENST00000476406 468 ntBASIC1.88□□□□□ -2.11
HIST1H1AQ02539 AC079804.2-201ENST00000490376 200 ntBASIC1.88□□□□□ -2.11
HIST1H1AQ02539 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.88□□□□□ -2.11
HIST1H1AQ02539 CCNHP1-201ENST00000513311 678 ntBASIC1.88□□□□□ -2.11
HIST1H1AQ02539 HMGB1P46-201ENST00000520062 610 ntBASIC1.88□□□□□ -2.11
HIST1H1AQ02539 AC243972.3-201ENST00000539655 198 ntBASIC1.88□□□□□ -2.11
HIST1H1AQ02539 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.88□□□□□ -2.11
HIST1H1AQ02539 CKS1BP1-201ENST00000555221 240 ntBASIC1.88□□□□□ -2.11
HIST1H1AQ02539 GTF3AP2-201ENST00000557014 266 ntBASIC1.88□□□□□ -2.11
HIST1H1AQ02539 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.88□□□□□ -2.11
HIST1H1AQ02539 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.88□□□□□ -2.11
HIST1H1AQ02539 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC1.88□□□□□ -2.11
HIST1H1AQ02539 RPL23AP84-201ENST00000571193 464 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms