Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AP003467.2-201ENST00000520175 319 ntBASIC2.74□□□□□ -1.97
TPM4P67936 HIGD1AP6-201ENST00000521833 279 ntBASIC2.74□□□□□ -1.97
TPM4P67936 AC087272.1-201ENST00000523624 533 ntBASIC2.74□□□□□ -1.97
TPM4P67936 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.74□□□□□ -1.97
TPM4P67936 RPL23AP84-201ENST00000571193 464 ntBASIC2.74□□□□□ -1.97
TPM4P67936 MIR4325-201ENST00000583049 90 ntBASIC2.74□□□□□ -1.97
TPM4P67936 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.74□□□□□ -1.97
TPM4P67936 AC012669.1-201ENST00000603209 283 ntBASIC2.74□□□□□ -1.97
TPM4P67936 AC016542.1-201ENST00000608259 493 ntBASIC2.74□□□□□ -1.97
TPM4P67936 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.74□□□□□ -1.97
TPM4P67936 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.74□□□□□ -1.97
TPM4P67936 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
TPM4P67936 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TPM4P67936 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.74□□□□□ -1.97
TPM4P67936 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TPM4P67936 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
TPM4P67936 AC007336.1-201ENST00000576365 3828 ntBASIC2.73□□□□□ -1.97
TPM4P67936 SNORA71.3-201ENST00000362582 128 ntBASIC2.73□□□□□ -1.97
TPM4P67936 ARF4P3-201ENST00000397387 509 ntBASIC2.73□□□□□ -1.97
TPM4P67936 AL356967.1-201ENST00000406305 431 ntBASIC2.73□□□□□ -1.97
TPM4P67936 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.73□□□□□ -1.97
TPM4P67936 HMGB3P31-201ENST00000413333 595 ntBASIC2.73□□□□□ -1.97
TPM4P67936 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TPM4P67936 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.73□□□□□ -1.97
TPM4P67936 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.73□□□□□ -1.97
TPM4P67936 HMGN3P1-201ENST00000453847 193 ntBASIC2.73□□□□□ -1.97
TPM4P67936 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.73□□□□□ -1.97
TPM4P67936 RNA5SP82-201ENST00000516707 92 ntBASIC2.73□□□□□ -1.97
TPM4P67936 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.73□□□□□ -1.97
TPM4P67936 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.73□□□□□ -1.97
TPM4P67936 AC079600.2-201ENST00000550076 130 ntBASIC2.73□□□□□ -1.97
TPM4P67936 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.73□□□□□ -1.97
TPM4P67936 ACTR3BP3-201ENST00000565577 979 ntBASIC2.73□□□□□ -1.97
TPM4P67936 MYL12BP1-201ENST00000569826 507 ntBASIC2.73□□□□□ -1.97
TPM4P67936 SRGNP1-201ENST00000603392 451 ntBASIC2.73□□□□□ -1.97
TPM4P67936 AC244100.1-202ENST00000621554 382 ntBASIC2.73□□□□□ -1.97
TPM4P67936 AC068880.5-201ENST00000624331 290 ntBASIC2.73□□□□□ -1.97
TPM4P67936 AC087359.1-201ENST00000508335 1740 ntBASIC2.73□□□□□ -1.97
TPM4P67936 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.73□□□□□ -1.97
TPM4P67936 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TPM4P67936 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TPM4P67936 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
TPM4P67936 AC135776.4-201ENST00000624300 1904 ntBASIC2.72□□□□□ -1.97
TPM4P67936 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
TPM4P67936 RPL21P132-201ENST00000331267 462 ntBASIC2.72□□□□□ -1.97
TPM4P67936 RNU6-859P-201ENST00000362728 107 ntBASIC2.72□□□□□ -1.97
TPM4P67936 RNU1-51P-201ENST00000365345 176 ntBASIC2.72□□□□□ -1.97
TPM4P67936 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.72□□□□□ -1.97
TPM4P67936 RNU6-921P-201ENST00000384361 107 ntBASIC2.72□□□□□ -1.97
TPM4P67936 MIR649-201ENST00000384843 97 ntBASIC2.72□□□□□ -1.97
TPM4P67936 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
TPM4P67936 AL158825.1-201ENST00000414735 521 ntBASIC2.72□□□□□ -1.97
TPM4P67936 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TPM4P67936 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.72□□□□□ -1.97
TPM4P67936 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.72□□□□□ -1.97
TPM4P67936 AL035410.1-201ENST00000427409 427 ntBASIC2.72□□□□□ -1.97
TPM4P67936 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.72□□□□□ -1.97
TPM4P67936 RPL7P49-201ENST00000471402 708 ntBASIC2.72□□□□□ -1.97
TPM4P67936 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.72□□□□□ -1.97
TPM4P67936 AC023424.2-201ENST00000493479 777 ntBASIC2.72□□□□□ -1.97
TPM4P67936 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.72□□□□□ -1.97
TPM4P67936 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.72□□□□□ -1.97
TPM4P67936 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TPM4P67936 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.72□□□□□ -1.97
TPM4P67936 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.72□□□□□ -1.97
TPM4P67936 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.72□□□□□ -1.97
TPM4P67936 AC021851.1-201ENST00000608537 1082 ntBASIC2.72□□□□□ -1.97
TPM4P67936 AC040168.1-201ENST00000623594 991 ntBASIC2.72□□□□□ -1.97
TPM4P67936 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.72□□□□□ -1.97
TPM4P67936 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.72□□□□□ -1.97
TPM4P67936 SEC63P2-201ENST00000503863 1939 ntBASIC2.72□□□□□ -1.97
TPM4P67936 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
TPM4P67936 RNU1-85P-201ENST00000364127 164 ntBASIC2.71□□□□□ -1.98
TPM4P67936 SET-203ENST00000372688 801 ntTSL 2 BASIC2.71□□□□□ -1.98
TPM4P67936 RNU6-40P-201ENST00000384254 107 ntBASIC2.71□□□□□ -1.98
TPM4P67936 MIR670-201ENST00000390142 98 ntBASIC2.71□□□□□ -1.98
TPM4P67936 AL360182.1-201ENST00000397433 468 ntBASIC2.71□□□□□ -1.98
TPM4P67936 RPP40P1-201ENST00000426762 456 ntBASIC2.71□□□□□ -1.98
TPM4P67936 EZH2P1-201ENST00000431167 291 ntBASIC2.71□□□□□ -1.98
TPM4P67936 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.71□□□□□ -1.98
TPM4P67936 NAP1L1P3-201ENST00000462291 880 ntBASIC2.71□□□□□ -1.98
TPM4P67936 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
TPM4P67936 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.71□□□□□ -1.98
TPM4P67936 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
TPM4P67936 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
TPM4P67936 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.71□□□□□ -1.98
TPM4P67936 AC004217.3-201ENST00000551552 878 ntBASIC2.71□□□□□ -1.98
TPM4P67936 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.71□□□□□ -1.98
TPM4P67936 MIR5194-201ENST00000582634 120 ntBASIC2.71□□□□□ -1.98
TPM4P67936 MIR3609-201ENST00000582661 80 ntBASIC2.71□□□□□ -1.98
TPM4P67936 AC009032.1-201ENST00000617574 431 ntBASIC2.71□□□□□ -1.98
TPM4P67936 MFSD8-245ENST00000641743 948 ntBASIC2.71□□□□□ -1.98
TPM4P67936 AC130650.2-201ENST00000618736 2403 ntBASIC2.71□□□□□ -1.98
TPM4P67936 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
TPM4P67936 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
TPM4P67936 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.7□□□□□ -1.98
TPM4P67936 TAF9BP2-201ENST00000400856 499 ntBASIC2.7□□□□□ -1.98
TPM4P67936 AL136372.1-201ENST00000403060 228 ntBASIC2.7□□□□□ -1.98
TPM4P67936 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.7□□□□□ -1.98
TPM4P67936 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms