Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 MIR4496-201ENST00000635896 61 ntBASIC1.98□□□□□ -2.09
UBA52P62987 AP000553.5-201ENST00000641933 54 ntBASIC1.98□□□□□ -2.09
UBA52P62987 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.98□□□□□ -2.09
UBA52P62987 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
UBA52P62987 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
UBA52P62987 MTCO1P6-201ENST00000481192 1384 ntBASIC1.98□□□□□ -2.09
UBA52P62987 AC006020.1-201ENST00000420179 1854 ntBASIC1.97□□□□□ -2.09
UBA52P62987 FAM133CP-201ENST00000332869 704 ntBASIC1.97□□□□□ -2.09
UBA52P62987 TAS2R15P-201ENST00000390674 928 ntBASIC1.97□□□□□ -2.09
UBA52P62987 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
UBA52P62987 RNA5SP38-201ENST00000410750 119 ntBASIC1.97□□□□□ -2.09
UBA52P62987 OR51A3P-201ENST00000413596 924 ntBASIC1.97□□□□□ -2.09
UBA52P62987 Z75741.2-201ENST00000417272 1167 ntBASIC1.97□□□□□ -2.09
UBA52P62987 AL137014.1-201ENST00000420490 1226 ntBASIC1.97□□□□□ -2.09
UBA52P62987 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.97□□□□□ -2.09
UBA52P62987 AC092427.1-202ENST00000430569 476 ntBASIC1.97□□□□□ -2.09
UBA52P62987 UBE2V1P6-201ENST00000430840 422 ntBASIC1.97□□□□□ -2.09
UBA52P62987 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
UBA52P62987 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.97□□□□□ -2.09
UBA52P62987 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.97□□□□□ -2.09
UBA52P62987 AP002345.1-201ENST00000456493 928 ntBASIC1.97□□□□□ -2.09
UBA52P62987 TRBV26-201ENST00000456572 344 ntBASIC1.97□□□□□ -2.09
UBA52P62987 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.97□□□□□ -2.09
UBA52P62987 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
UBA52P62987 AC025755.1-201ENST00000521306 278 ntBASIC1.97□□□□□ -2.09
UBA52P62987 AC074029.1-201ENST00000552531 1044 ntBASIC1.97□□□□□ -2.09
UBA52P62987 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC1.97□□□□□ -2.09
UBA52P62987 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.97□□□□□ -2.09
UBA52P62987 AC245517.5-201ENST00000611529 162 ntBASIC1.97□□□□□ -2.09
UBA52P62987 NF1P10-201ENST00000613227 742 ntBASIC1.97□□□□□ -2.09
UBA52P62987 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
UBA52P62987 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.97□□□□□ -2.09
UBA52P62987 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.97□□□□□ -2.09
UBA52P62987 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC1.97□□□□□ -2.09
UBA52P62987 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
UBA52P62987 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
UBA52P62987 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
UBA52P62987 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.96□□□□□ -2.1
UBA52P62987 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.96□□□□□ -2.1
UBA52P62987 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
UBA52P62987 HMGN2P38-201ENST00000423806 265 ntBASIC1.96□□□□□ -2.1
UBA52P62987 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.96□□□□□ -2.1
UBA52P62987 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.96□□□□□ -2.1
UBA52P62987 ELOCP13-201ENST00000443934 329 ntBASIC1.96□□□□□ -2.1
UBA52P62987 RPL23AP23-201ENST00000452590 471 ntBASIC1.96□□□□□ -2.1
UBA52P62987 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.96□□□□□ -2.1
UBA52P62987 snoU13.23-201ENST00000458863 104 ntBASIC1.96□□□□□ -2.1
UBA52P62987 RNU6-717P-201ENST00000459076 104 ntBASIC1.96□□□□□ -2.1
UBA52P62987 AC010301.1-201ENST00000473936 355 ntBASIC1.96□□□□□ -2.1
UBA52P62987 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.96□□□□□ -2.1
UBA52P62987 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
UBA52P62987 HMGB1P22-201ENST00000505315 124 ntBASIC1.96□□□□□ -2.1
UBA52P62987 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.96□□□□□ -2.1
UBA52P62987 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.96□□□□□ -2.1
UBA52P62987 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.96□□□□□ -2.1
UBA52P62987 AC034244.2-201ENST00000514668 858 ntBASIC1.96□□□□□ -2.1
UBA52P62987 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.96□□□□□ -2.1
UBA52P62987 AC021269.2-201ENST00000532318 330 ntBASIC1.96□□□□□ -2.1
UBA52P62987 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC1.96□□□□□ -2.1
UBA52P62987 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.96□□□□□ -2.1
UBA52P62987 MIR1273D-201ENST00000577266 86 ntBASIC1.96□□□□□ -2.1
UBA52P62987 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
UBA52P62987 AC061975.8-201ENST00000587058 721 ntBASIC1.96□□□□□ -2.1
UBA52P62987 AC067747.1-201ENST00000608026 250 ntBASIC1.96□□□□□ -2.1
UBA52P62987 MIR6840-201ENST00000611937 71 ntBASIC1.96□□□□□ -2.1
UBA52P62987 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.96□□□□□ -2.1
UBA52P62987 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
UBA52P62987 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.95□□□□□ -2.1
UBA52P62987 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.95□□□□□ -2.1
UBA52P62987 RNA5SP139-201ENST00000364340 117 ntBASIC1.95□□□□□ -2.1
UBA52P62987 RNU1-91P-201ENST00000364746 163 ntBASIC1.95□□□□□ -2.1
UBA52P62987 RNU6-1181P-201ENST00000384191 106 ntBASIC1.95□□□□□ -2.1
UBA52P62987 AC096533.1-201ENST00000411645 353 ntBASIC1.95□□□□□ -2.1
UBA52P62987 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.95□□□□□ -2.1
UBA52P62987 AC096632.1-201ENST00000427395 310 ntBASIC1.95□□□□□ -2.1
UBA52P62987 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC1.95□□□□□ -2.1
UBA52P62987 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
UBA52P62987 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.95□□□□□ -2.1
UBA52P62987 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.95□□□□□ -2.1
UBA52P62987 AC090515.1-201ENST00000465295 476 ntBASIC1.95□□□□□ -2.1
UBA52P62987 RPS23P3-201ENST00000470993 430 ntBASIC1.95□□□□□ -2.1
UBA52P62987 RPS20P22-201ENST00000473700 357 ntBASIC1.95□□□□□ -2.1
UBA52P62987 LARP7P4-201ENST00000481075 878 ntBASIC1.95□□□□□ -2.1
UBA52P62987 AC114322.1-201ENST00000506771 926 ntBASIC1.95□□□□□ -2.1
UBA52P62987 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.95□□□□□ -2.1
UBA52P62987 RNA5SP281-201ENST00000516504 135 ntBASIC1.95□□□□□ -2.1
UBA52P62987 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
UBA52P62987 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.95□□□□□ -2.1
UBA52P62987 DEFB122-202ENST00000569013 197 ntBASIC1.95□□□□□ -2.1
UBA52P62987 AC084373.1-201ENST00000603311 235 ntBASIC1.95□□□□□ -2.1
UBA52P62987 AC007620.3-201ENST00000608131 497 ntBASIC1.95□□□□□ -2.1
UBA52P62987 AL592494.3-201ENST00000609485 464 ntBASIC1.95□□□□□ -2.1
UBA52P62987 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.95□□□□□ -2.1
UBA52P62987 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.95□□□□□ -2.1
UBA52P62987 AC079597.1-201ENST00000624306 508 ntBASIC1.95□□□□□ -2.1
UBA52P62987 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
UBA52P62987 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
UBA52P62987 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
UBA52P62987 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
UBA52P62987 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms