Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.95□□□□□ -1.94
LIM2P55344 AC006390.1-201ENST00000508068 283 ntBASIC2.95□□□□□ -1.94
LIM2P55344 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.95□□□□□ -1.94
LIM2P55344 RNU6-1095P-201ENST00000516148 108 ntBASIC2.95□□□□□ -1.94
LIM2P55344 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.95□□□□□ -1.94
LIM2P55344 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.95□□□□□ -1.94
LIM2P55344 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.95□□□□□ -1.94
LIM2P55344 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.95□□□□□ -1.94
LIM2P55344 DUXAP3-201ENST00000603616 594 ntBASIC2.95□□□□□ -1.94
LIM2P55344 MTND3P19-201ENST00000603825 345 ntBASIC2.95□□□□□ -1.94
LIM2P55344 AL357080.1-201ENST00000617394 239 ntBASIC2.95□□□□□ -1.94
LIM2P55344 AC099506.2-201ENST00000623074 221 ntBASIC2.95□□□□□ -1.94
LIM2P55344 AL356585.4-201ENST00000623078 1229 ntBASIC2.95□□□□□ -1.94
LIM2P55344 AC068787.1-201ENST00000623908 691 ntBASIC2.95□□□□□ -1.94
LIM2P55344 AP001002.2-201ENST00000625137 386 ntBASIC2.95□□□□□ -1.94
LIM2P55344 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
LIM2P55344 AC005539.1-201ENST00000443768 1479 ntBASIC2.95□□□□□ -1.94
LIM2P55344 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
LIM2P55344 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
LIM2P55344 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
LIM2P55344 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.94□□□□□ -1.94
LIM2P55344 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LIM2P55344 OR4G11P-202ENST00000642116 1414 ntBASIC2.94□□□□□ -1.94
LIM2P55344 AL672296.1-201ENST00000427780 2158 ntBASIC2.94□□□□□ -1.94
LIM2P55344 AP001148.1-201ENST00000624124 2359 ntBASIC2.94□□□□□ -1.94
LIM2P55344 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
LIM2P55344 RPL23AP57-201ENST00000332361 466 ntBASIC2.94□□□□□ -1.94
LIM2P55344 Y_RNA.408-201ENST00000383987 102 ntBASIC2.94□□□□□ -1.94
LIM2P55344 SNORD15B-201ENST00000384714 146 ntBASIC2.94□□□□□ -1.94
LIM2P55344 AC110754.1-201ENST00000399740 601 ntBASIC2.94□□□□□ -1.94
LIM2P55344 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.94□□□□□ -1.94
LIM2P55344 MTATP6P27-201ENST00000416987 621 ntBASIC2.94□□□□□ -1.94
LIM2P55344 RPL7P30-201ENST00000420888 709 ntBASIC2.94□□□□□ -1.94
LIM2P55344 DUTP6-201ENST00000425573 462 ntBASIC2.94□□□□□ -1.94
LIM2P55344 OR2AS1P-201ENST00000427827 319 ntBASIC2.94□□□□□ -1.94
LIM2P55344 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.94□□□□□ -1.94
LIM2P55344 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.94□□□□□ -1.94
LIM2P55344 RPS12P18-201ENST00000442381 270 ntBASIC2.94□□□□□ -1.94
LIM2P55344 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.94□□□□□ -1.94
LIM2P55344 AL606517.1-201ENST00000446914 387 ntBASIC2.94□□□□□ -1.94
LIM2P55344 MTCO3P11-201ENST00000455103 774 ntBASIC2.94□□□□□ -1.94
LIM2P55344 HMGN2P16-201ENST00000456802 261 ntBASIC2.94□□□□□ -1.94
LIM2P55344 RN7SL75P-201ENST00000461926 281 ntBASIC2.94□□□□□ -1.94
LIM2P55344 AC097493.1-201ENST00000463958 372 ntBASIC2.94□□□□□ -1.94
LIM2P55344 MTND1P16-201ENST00000465177 898 ntBASIC2.94□□□□□ -1.94
LIM2P55344 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.94□□□□□ -1.94
LIM2P55344 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.94□□□□□ -1.94
LIM2P55344 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.94□□□□□ -1.94
LIM2P55344 TMEM251P1-201ENST00000503717 318 ntBASIC2.94□□□□□ -1.94
LIM2P55344 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.94□□□□□ -1.94
LIM2P55344 RNU6-311P-201ENST00000516224 102 ntBASIC2.94□□□□□ -1.94
LIM2P55344 RNA5SP468-201ENST00000516782 93 ntBASIC2.94□□□□□ -1.94
LIM2P55344 OR4P1P-201ENST00000530808 1136 ntBASIC2.94□□□□□ -1.94
LIM2P55344 AC023050.2-201ENST00000544968 387 ntBASIC2.94□□□□□ -1.94
LIM2P55344 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.94□□□□□ -1.94
LIM2P55344 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.94□□□□□ -1.94
LIM2P55344 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.94□□□□□ -1.94
LIM2P55344 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.94□□□□□ -1.94
LIM2P55344 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.94□□□□□ -1.94
LIM2P55344 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.94□□□□□ -1.94
LIM2P55344 XIAPP1-201ENST00000603162 600 ntBASIC2.94□□□□□ -1.94
LIM2P55344 BNIP3P11-201ENST00000603878 563 ntBASIC2.94□□□□□ -1.94
LIM2P55344 AC103710.3-201ENST00000608157 948 ntBASIC2.94□□□□□ -1.94
LIM2P55344 AC027449.1-201ENST00000608890 407 ntBASIC2.94□□□□□ -1.94
LIM2P55344 AC097478.2-201ENST00000610572 514 ntBASIC2.94□□□□□ -1.94
LIM2P55344 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.94□□□□□ -1.94
LIM2P55344 AL596245.1-201ENST00000618994 362 ntBASIC2.94□□□□□ -1.94
LIM2P55344 AC018755.4-201ENST00000619715 454 ntBASIC2.94□□□□□ -1.94
LIM2P55344 AC023510.2-201ENST00000622162 746 ntBASIC2.94□□□□□ -1.94
LIM2P55344 MIR622-201ENST00000638396 96 ntBASIC2.94□□□□□ -1.94
LIM2P55344 AC006927.4-201ENST00000639187 543 ntBASIC2.94□□□□□ -1.94
LIM2P55344 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
LIM2P55344 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
LIM2P55344 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.94□□□□□ -1.94
LIM2P55344 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LIM2P55344 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
LIM2P55344 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.94□□□□□ -1.94
LIM2P55344 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LIM2P55344 AP002907.1-201ENST00000606361 1430 ntBASIC2.93□□□□□ -1.94
LIM2P55344 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.93□□□□□ -1.94
LIM2P55344 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LIM2P55344 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
LIM2P55344 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.93□□□□□ -1.94
LIM2P55344 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LIM2P55344 AL592310.1-201ENST00000414330 671 ntBASIC2.93□□□□□ -1.94
LIM2P55344 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LIM2P55344 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.93□□□□□ -1.94
LIM2P55344 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.93□□□□□ -1.94
LIM2P55344 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.93□□□□□ -1.94
LIM2P55344 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
LIM2P55344 AL662791.1-201ENST00000441992 928 ntBASIC2.93□□□□□ -1.94
LIM2P55344 HSPE1P28-201ENST00000443139 211 ntBASIC2.93□□□□□ -1.94
LIM2P55344 AC016696.1-201ENST00000446949 318 ntBASIC2.93□□□□□ -1.94
LIM2P55344 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.93□□□□□ -1.94
LIM2P55344 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.93□□□□□ -1.94
LIM2P55344 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.93□□□□□ -1.94
LIM2P55344 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.93□□□□□ -1.94
LIM2P55344 snoU13.4-201ENST00000458916 104 ntBASIC2.93□□□□□ -1.94
LIM2P55344 RPS3AP43-201ENST00000479743 781 ntBASIC2.93□□□□□ -1.94
LIM2P55344 AC096751.1-202ENST00000502691 1067 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms