Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 SNORD114-30-201ENST00000364448 72 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 RNA5SP37-201ENST00000365420 130 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 RNU6-1074P-201ENST00000383995 104 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 SNORA51.12-201ENST00000384448 134 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 FABP12P1-201ENST00000401911 322 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 RPS3AP25-201ENST00000411660 793 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC1.79□□□□□ -2.12
FOXA3P55318 AC079780.1-201ENST00000428259 207 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 AL512649.1-201ENST00000428997 581 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 EZH2P1-201ENST00000431167 291 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.79□□□□□ -2.12
FOXA3P55318 ELOCP3-201ENST00000439303 348 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.79□□□□□ -2.12
FOXA3P55318 AL135938.1-201ENST00000443141 297 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 MORF4L1P4-201ENST00000450245 976 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 MRPL35P4-201ENST00000453682 566 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 AC233279.1-201ENST00000455300 423 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 FTH1P2-201ENST00000466086 412 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.79□□□□□ -2.12
FOXA3P55318 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.79□□□□□ -2.12
FOXA3P55318 AC006445.2-201ENST00000510061 472 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 RNA5SP341-201ENST00000516261 117 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 NDUFS5P6-201ENST00000529136 295 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 AP000889.2-201ENST00000532684 490 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.79□□□□□ -2.12
FOXA3P55318 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
FOXA3P55318 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.79□□□□□ -2.12
FOXA3P55318 AC010546.1-201ENST00000569391 485 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.79□□□□□ -2.12
FOXA3P55318 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.79□□□□□ -2.12
FOXA3P55318 AL513477.2-201ENST00000607858 568 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC1.79□□□□□ -2.12
FOXA3P55318 AL513185.3-201ENST00000433335 1300 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 AL049780.3-201ENST00000624612 1583 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 CKAP2P1-201ENST00000555477 2049 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
FOXA3P55318 AC009902.3-201ENST00000606235 2172 ntBASIC1.79□□□□□ -2.12
FOXA3P55318 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
FOXA3P55318 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
FOXA3P55318 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
FOXA3P55318 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
FOXA3P55318 MTND5P1-201ENST00000445440 1375 ntBASIC1.78□□□□□ -2.12
FOXA3P55318 AL596028.1-201ENST00000326971 197 ntBASIC1.78□□□□□ -2.12
FOXA3P55318 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.78□□□□□ -2.12
FOXA3P55318 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
FOXA3P55318 MIR34B-201ENST00000385076 84 ntBASIC1.78□□□□□ -2.12
FOXA3P55318 MIR27B-201ENST00000385129 97 ntBASIC1.78□□□□□ -2.12
FOXA3P55318 MIR670-201ENST00000390142 98 ntBASIC1.78□□□□□ -2.12
FOXA3P55318 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
FOXA3P55318 RNU6-712P-201ENST00000410558 100 ntBASIC1.78□□□□□ -2.12
FOXA3P55318 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.78□□□□□ -2.12
FOXA3P55318 FO393419.3-201ENST00000428741 282 ntBASIC1.78□□□□□ -2.12
FOXA3P55318 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.78□□□□□ -2.12
FOXA3P55318 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
FOXA3P55318 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.78□□□□□ -2.12
FOXA3P55318 AC009296.1-201ENST00000443146 155 ntBASIC1.78□□□□□ -2.12
FOXA3P55318 AC104389.3-201ENST00000445629 235 ntBASIC1.78□□□□□ -2.12
FOXA3P55318 IFNA11P-201ENST00000446352 526 ntBASIC1.78□□□□□ -2.12
FOXA3P55318 snoU13.22-201ENST00000459428 104 ntBASIC1.78□□□□□ -2.12
FOXA3P55318 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.78□□□□□ -2.12
FOXA3P55318 AC090096.1-201ENST00000489168 390 ntBASIC1.78□□□□□ -2.12
FOXA3P55318 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.78□□□□□ -2.12
FOXA3P55318 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
FOXA3P55318 AC096725.1-201ENST00000514266 313 ntBASIC1.78□□□□□ -2.12
FOXA3P55318 HMGB1P23-201ENST00000518743 568 ntBASIC1.78□□□□□ -2.12
FOXA3P55318 HMGB1P46-201ENST00000520062 610 ntBASIC1.78□□□□□ -2.12
FOXA3P55318 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC1.78□□□□□ -2.12
FOXA3P55318 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.78□□□□□ -2.12
FOXA3P55318 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.78□□□□□ -2.12
FOXA3P55318 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.78□□□□□ -2.12
FOXA3P55318 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.78□□□□□ -2.12
FOXA3P55318 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.78□□□□□ -2.12
FOXA3P55318 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.78□□□□□ -2.12
FOXA3P55318 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
FOXA3P55318 SDAD1P2-201ENST00000441308 2028 ntBASIC1.78□□□□□ -2.13
FOXA3P55318 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
FOXA3P55318 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
FOXA3P55318 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
FOXA3P55318 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
FOXA3P55318 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
FOXA3P55318 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
FOXA3P55318 SNORA71.3-201ENST00000362582 128 ntBASIC1.77□□□□□ -2.13
FOXA3P55318 OR5H15-201ENST00000383696 930 ntBASIC1.77□□□□□ -2.13
FOXA3P55318 CYCSP45-201ENST00000402289 315 ntBASIC1.77□□□□□ -2.13
FOXA3P55318 RNU6ATAC34P-201ENST00000408879 121 ntBASIC1.77□□□□□ -2.13
FOXA3P55318 AL024507.1-201ENST00000412741 274 ntBASIC1.77□□□□□ -2.13
FOXA3P55318 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC1.77□□□□□ -2.13
FOXA3P55318 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
FOXA3P55318 MTND1P23-201ENST00000416931 372 ntBASIC1.77□□□□□ -2.13
FOXA3P55318 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.77□□□□□ -2.13
FOXA3P55318 RPL21P133-201ENST00000443666 476 ntBASIC1.77□□□□□ -2.13
FOXA3P55318 OR6K5P-201ENST00000447050 945 ntBASIC1.77□□□□□ -2.13
FOXA3P55318 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.77□□□□□ -2.13
FOXA3P55318 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.77□□□□□ -2.13
FOXA3P55318 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.77□□□□□ -2.13
FOXA3P55318 TRBV26-201ENST00000456572 344 ntBASIC1.77□□□□□ -2.13
FOXA3P55318 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.77□□□□□ -2.13
FOXA3P55318 RNU7-26P-201ENST00000458980 63 ntBASIC1.77□□□□□ -2.13
FOXA3P55318 AP001992.1-205ENST00000462248 379 ntBASIC1.77□□□□□ -2.13
FOXA3P55318 AC078857.1-201ENST00000469870 667 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms