Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.57□□□□□ -2
CLTCL1P53675 VN1R74P-201ENST00000613259 503 ntBASIC2.57□□□□□ -2
CLTCL1P53675 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.57□□□□□ -2
CLTCL1P53675 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
CLTCL1P53675 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CLTCL1P53675 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.57□□□□□ -2
CLTCL1P53675 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLTCL1P53675 MTCO1P6-201ENST00000481192 1384 ntBASIC2.57□□□□□ -2
CLTCL1P53675 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLTCL1P53675 MIR337-201ENST00000362281 93 ntBASIC2.57□□□□□ -2
CLTCL1P53675 Y_RNA.116-201ENST00000363292 103 ntBASIC2.57□□□□□ -2
CLTCL1P53675 AC240504.1-201ENST00000395709 845 ntBASIC2.57□□□□□ -2
CLTCL1P53675 HMGB3P2-201ENST00000411913 584 ntBASIC2.57□□□□□ -2
CLTCL1P53675 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.57□□□□□ -2
CLTCL1P53675 XKRY2-201ENST00000442362 1093 ntBASIC2.57□□□□□ -2
CLTCL1P53675 USP9YP15-201ENST00000442391 422 ntBASIC2.57□□□□□ -2
CLTCL1P53675 AC011753.1-201ENST00000451001 220 ntBASIC2.57□□□□□ -2
CLTCL1P53675 AC005912.1-201ENST00000495392 255 ntBASIC2.57□□□□□ -2
CLTCL1P53675 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.57□□□□□ -2
CLTCL1P53675 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC2.57□□□□□ -2
CLTCL1P53675 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.57□□□□□ -2
CLTCL1P53675 AC126177.3-201ENST00000551839 688 ntBASIC2.57□□□□□ -2
CLTCL1P53675 AC090751.1-201ENST00000566966 267 ntBASIC2.57□□□□□ -2
CLTCL1P53675 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC2.57□□□□□ -2
CLTCL1P53675 AL359821.1-201ENST00000605519 182 ntBASIC2.57□□□□□ -2
CLTCL1P53675 AL121917.1-203ENST00000605534 577 ntBASIC2.57□□□□□ -2
CLTCL1P53675 MIR8081-201ENST00000611533 95 ntBASIC2.57□□□□□ -2
CLTCL1P53675 AC092159.4-201ENST00000624944 550 ntBASIC2.57□□□□□ -2
CLTCL1P53675 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.56□□□□□ -2
CLTCL1P53675 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
CLTCL1P53675 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.56□□□□□ -2
CLTCL1P53675 AC104564.1-201ENST00000493028 407 ntBASIC2.56□□□□□ -2
CLTCL1P53675 AC107393.1-201ENST00000512403 346 ntBASIC2.56□□□□□ -2
CLTCL1P53675 RNU6ATAC39P-201ENST00000516309 149 ntBASIC2.56□□□□□ -2
CLTCL1P53675 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.56□□□□□ -2
CLTCL1P53675 RN7SKP96-201ENST00000516948 297 ntBASIC2.56□□□□□ -2
CLTCL1P53675 MIR4448-201ENST00000584360 86 ntBASIC2.56□□□□□ -2
CLTCL1P53675 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.56□□□□□ -2
CLTCL1P53675 C2orf27A-204ENST00000623058 969 ntBASIC2.56□□□□□ -2
CLTCL1P53675 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.55□□□□□ -2
CLTCL1P53675 MIR499A-201ENST00000384903 122 ntBASIC2.55□□□□□ -2
CLTCL1P53675 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.55□□□□□ -2
CLTCL1P53675 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.55□□□□□ -2
CLTCL1P53675 SNORA25.15-201ENST00000516487 89 ntBASIC2.55□□□□□ -2
CLTCL1P53675 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.55□□□□□ -2
CLTCL1P53675 OR8X1P-201ENST00000534542 869 ntBASIC2.55□□□□□ -2
CLTCL1P53675 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.55□□□□□ -2
CLTCL1P53675 OR1S1-201ENST00000624470 978 ntBASIC2.55□□□□□ -2
CLTCL1P53675 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.55□□□□□ -2
CLTCL1P53675 FO624990.1-201ENST00000636373 85 ntBASIC2.55□□□□□ -2
CLTCL1P53675 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
CLTCL1P53675 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.54□□□□□ -2
CLTCL1P53675 AC131280.1-202ENST00000624067 4211 ntBASIC2.54□□□□□ -2
CLTCL1P53675 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.54□□□□□ -2
CLTCL1P53675 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.54□□□□□ -2
CLTCL1P53675 TOMM22P1-201ENST00000418578 312 ntBASIC2.54□□□□□ -2
CLTCL1P53675 HMGB1P12-201ENST00000438594 598 ntBASIC2.54□□□□□ -2
CLTCL1P53675 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.54□□□□□ -2
CLTCL1P53675 NDUFA5P6-201ENST00000542110 379 ntBASIC2.54□□□□□ -2
CLTCL1P53675 DNAJC19P9-201ENST00000555084 351 ntBASIC2.54□□□□□ -2
CLTCL1P53675 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.54□□□□□ -2
CLTCL1P53675 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.54□□□□□ -2
CLTCL1P53675 UBE2L2-201ENST00000254302 429 ntBASIC2.53□□□□□ -2
CLTCL1P53675 Y_RNA.355-201ENST00000365462 98 ntBASIC2.53□□□□□ -2
CLTCL1P53675 SNORA51.11-201ENST00000384442 131 ntBASIC2.53□□□□□ -2
CLTCL1P53675 RNU6-178P-201ENST00000384631 104 ntBASIC2.53□□□□□ -2
CLTCL1P53675 MIR7-2-201ENST00000384970 110 ntBASIC2.53□□□□□ -2
CLTCL1P53675 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CLTCL1P53675 FGF7P8-201ENST00000402994 292 ntBASIC2.53□□□□□ -2
CLTCL1P53675 MIR1323-201ENST00000408090 73 ntBASIC2.53□□□□□ -2
CLTCL1P53675 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CLTCL1P53675 RPL21P39-201ENST00000463605 483 ntBASIC2.53□□□□□ -2
CLTCL1P53675 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.53□□□□□ -2
CLTCL1P53675 AC108078.2-201ENST00000510750 236 ntBASIC2.53□□□□□ -2
CLTCL1P53675 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.53□□□□□ -2
CLTCL1P53675 AL353748.2-201ENST00000622148 471 ntBASIC2.53□□□□□ -2
CLTCL1P53675 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
CLTCL1P53675 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.53□□□□□ -2
CLTCL1P53675 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.53□□□□□ -2
CLTCL1P53675 SNORA25.9-201ENST00000365087 128 ntBASIC2.53□□□□□ -2
CLTCL1P53675 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.53□□□□□ -2
CLTCL1P53675 AL021407.1-201ENST00000404531 386 ntBASIC2.53□□□□□ -2
CLTCL1P53675 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.53□□□□□ -2
CLTCL1P53675 AP1B1P2-201ENST00000416196 106 ntBASIC2.53□□□□□ -2
CLTCL1P53675 HMGB1P31-201ENST00000437242 427 ntBASIC2.53□□□□□ -2
CLTCL1P53675 OR51B8P-201ENST00000449892 769 ntBASIC2.53□□□□□ -2
CLTCL1P53675 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.53□□□□□ -2
CLTCL1P53675 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.53□□□□□ -2
CLTCL1P53675 SETP2-201ENST00000553886 926 ntBASIC2.53□□□□□ -2
CLTCL1P53675 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.53□□□□□ -2
CLTCL1P53675 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.53□□□□□ -2
CLTCL1P53675 AL590099.1-201ENST00000615276 138 ntBASIC2.53□□□□□ -2
CLTCL1P53675 AC107021.2-201ENST00000567714 2095 ntBASIC2.53□□□□□ -2.01
CLTCL1P53675 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLTCL1P53675 BTF3P4-201ENST00000418852 495 ntBASIC2.52□□□□□ -2.01
CLTCL1P53675 CDC42P1-201ENST00000456658 548 ntBASIC2.52□□□□□ -2.01
CLTCL1P53675 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLTCL1P53675 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.52□□□□□ -2.01
CLTCL1P53675 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.52□□□□□ -2.01
CLTCL1P53675 KATNBL1P1-201ENST00000605192 748 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms