Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC006077.1-201ENST00000604746 343 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 AC010738.1-201ENST00000604970 987 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.65□□□□□ -1.83
LIMK1P53667 AC099778.2-201ENST00000610904 211 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 AC079395.3-201ENST00000615161 484 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 AC095031.1-201ENST00000623685 672 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 AP000676.4-201ENST00000624659 623 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.65□□□□□ -1.83
LIMK1P53667 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.65□□□□□ -1.83
LIMK1P53667 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.65□□□□□ -1.83
LIMK1P53667 CRYM-AS1-204ENST00000637983 556 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 AC119674.1-207ENST00000641355 633 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LIMK1P53667 AC097714.1-201ENST00000511272 1647 ntBASIC3.65□□□□□ -1.83
LIMK1P53667 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.65□□□□□ -1.83
LIMK1P53667 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LIMK1P53667 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.64□□□□□ -1.83
LIMK1P53667 MAPK10-362ENST00000641864 4484 ntBASIC3.64□□□□□ -1.83
LIMK1P53667 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
LIMK1P53667 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
LIMK1P53667 ZNF826P-207ENST00000622273 1910 ntBASIC3.64□□□□□ -1.83
LIMK1P53667 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LIMK1P53667 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
LIMK1P53667 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
LIMK1P53667 SNORD51-201ENST00000384320 80 ntBASIC3.64□□□□□ -1.83
LIMK1P53667 SNORA48.8-201ENST00000391324 134 ntBASIC3.64□□□□□ -1.83
LIMK1P53667 RPL7P60-201ENST00000397636 735 ntBASIC3.64□□□□□ -1.83
LIMK1P53667 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.64□□□□□ -1.83
LIMK1P53667 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.64□□□□□ -1.83
LIMK1P53667 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.64□□□□□ -1.83
LIMK1P53667 AC127526.1-201ENST00000417526 366 ntBASIC3.64□□□□□ -1.83
LIMK1P53667 AC099677.1-201ENST00000420575 175 ntBASIC3.64□□□□□ -1.83
LIMK1P53667 MTND1P32-201ENST00000433043 938 ntBASIC3.64□□□□□ -1.83
LIMK1P53667 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.64□□□□□ -1.83
LIMK1P53667 MTCYBP34-201ENST00000439552 670 ntBASIC3.64□□□□□ -1.83
LIMK1P53667 HMGB1P37-201ENST00000439613 609 ntBASIC3.64□□□□□ -1.83
LIMK1P53667 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.64□□□□□ -1.83
LIMK1P53667 RANP8-201ENST00000444720 713 ntBASIC3.64□□□□□ -1.83
LIMK1P53667 ARPC3P5-201ENST00000448802 534 ntBASIC3.64□□□□□ -1.83
LIMK1P53667 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.64□□□□□ -1.83
LIMK1P53667 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LIMK1P53667 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.64□□□□□ -1.83
LIMK1P53667 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.64□□□□□ -1.83
LIMK1P53667 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.64□□□□□ -1.83
LIMK1P53667 MTND4LP22-201ENST00000508209 276 ntBASIC3.64□□□□□ -1.83
LIMK1P53667 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.64□□□□□ -1.83
LIMK1P53667 AC021146.1-201ENST00000511202 716 ntBASIC3.64□□□□□ -1.83
LIMK1P53667 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.64□□□□□ -1.83
LIMK1P53667 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.64□□□□□ -1.83
LIMK1P53667 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.64□□□□□ -1.83
LIMK1P53667 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.64□□□□□ -1.83
LIMK1P53667 OR4T1P-201ENST00000554933 911 ntBASIC3.64□□□□□ -1.83
LIMK1P53667 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.64□□□□□ -1.83
LIMK1P53667 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.64□□□□□ -1.83
LIMK1P53667 AL137849.1-201ENST00000604767 169 ntBASIC3.64□□□□□ -1.83
LIMK1P53667 AL355810.1-201ENST00000614629 552 ntBASIC3.64□□□□□ -1.83
LIMK1P53667 AC021755.4-201ENST00000616620 456 ntBASIC3.64□□□□□ -1.83
LIMK1P53667 AC006111.3-201ENST00000622137 383 ntBASIC3.64□□□□□ -1.83
LIMK1P53667 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.64□□□□□ -1.83
LIMK1P53667 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.64□□□□□ -1.83
LIMK1P53667 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
LIMK1P53667 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
LIMK1P53667 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LIMK1P53667 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LIMK1P53667 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.64□□□□□ -1.83
LIMK1P53667 SGO1P2-201ENST00000429458 1589 ntBASIC3.63□□□□□ -1.83
LIMK1P53667 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
LIMK1P53667 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LIMK1P53667 AL022578.1-201ENST00000439330 1433 ntBASIC3.63□□□□□ -1.83
LIMK1P53667 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LIMK1P53667 CR381670.1-201ENST00000624291 1693 ntBASIC3.63□□□□□ -1.83
LIMK1P53667 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LIMK1P53667 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LIMK1P53667 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
LIMK1P53667 RPL23AP57-201ENST00000332361 466 ntBASIC3.63□□□□□ -1.83
LIMK1P53667 SNORD9-201ENST00000362566 104 ntBASIC3.63□□□□□ -1.83
LIMK1P53667 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
LIMK1P53667 HMGB1P17-201ENST00000403495 628 ntBASIC3.63□□□□□ -1.83
LIMK1P53667 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.63□□□□□ -1.83
LIMK1P53667 RPL7P30-201ENST00000420888 709 ntBASIC3.63□□□□□ -1.83
LIMK1P53667 AL953862.1-201ENST00000423016 168 ntBASIC3.63□□□□□ -1.83
LIMK1P53667 AC002075.2-201ENST00000425207 252 ntBASIC3.63□□□□□ -1.83
LIMK1P53667 AC233728.2-201ENST00000425348 757 ntBASIC3.63□□□□□ -1.83
LIMK1P53667 SKP1P1-201ENST00000438081 489 ntBASIC3.63□□□□□ -1.83
LIMK1P53667 RABEPKP1-201ENST00000440529 1026 ntBASIC3.63□□□□□ -1.83
LIMK1P53667 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.63□□□□□ -1.83
LIMK1P53667 RPL36AP33-201ENST00000450395 310 ntBASIC3.63□□□□□ -1.83
LIMK1P53667 VN1R40P-201ENST00000455196 941 ntBASIC3.63□□□□□ -1.83
LIMK1P53667 RNU7-136P-201ENST00000458819 69 ntBASIC3.63□□□□□ -1.83
LIMK1P53667 MEMO1P3-201ENST00000459811 302 ntBASIC3.63□□□□□ -1.83
LIMK1P53667 HMGB1P25-201ENST00000468402 607 ntBASIC3.63□□□□□ -1.83
LIMK1P53667 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.63□□□□□ -1.83
LIMK1P53667 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.63□□□□□ -1.83
LIMK1P53667 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.63□□□□□ -1.83
LIMK1P53667 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.63□□□□□ -1.83
LIMK1P53667 AC006499.2-201ENST00000513470 337 ntBASIC3.63□□□□□ -1.83
LIMK1P53667 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.63□□□□□ -1.83
LIMK1P53667 AC239860.2-201ENST00000525886 270 ntBASIC3.63□□□□□ -1.83
LIMK1P53667 AC018630.1-201ENST00000541376 925 ntBASIC3.63□□□□□ -1.83
LIMK1P53667 CYCSP2-201ENST00000558168 301 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms