Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AL590233.1-201ENST00000430017 456 ntBASIC3.88□□□□□ -1.79
CLCN3P51790 AL353706.1-201ENST00000436728 494 ntBASIC3.88□□□□□ -1.79
CLCN3P51790 MTND5P14-201ENST00000441481 1267 ntBASIC3.88□□□□□ -1.79
CLCN3P51790 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.88□□□□□ -1.79
CLCN3P51790 EEF1E1P1-201ENST00000446998 430 ntBASIC3.88□□□□□ -1.79
CLCN3P51790 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.88□□□□□ -1.79
CLCN3P51790 AP001992.1-205ENST00000462248 379 ntBASIC3.88□□□□□ -1.79
CLCN3P51790 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.88□□□□□ -1.79
CLCN3P51790 AC109486.1-201ENST00000486833 374 ntBASIC3.88□□□□□ -1.79
CLCN3P51790 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLCN3P51790 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.88□□□□□ -1.79
CLCN3P51790 AC024589.1-201ENST00000512207 263 ntBASIC3.88□□□□□ -1.79
CLCN3P51790 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.88□□□□□ -1.79
CLCN3P51790 RPL12P22-201ENST00000519073 490 ntBASIC3.88□□□□□ -1.79
CLCN3P51790 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.88□□□□□ -1.79
CLCN3P51790 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.88□□□□□ -1.79
CLCN3P51790 HIGD1AP10-201ENST00000527837 282 ntBASIC3.88□□□□□ -1.79
CLCN3P51790 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.88□□□□□ -1.79
CLCN3P51790 AL139174.1-201ENST00000531489 886 ntBASIC3.88□□□□□ -1.79
CLCN3P51790 AC068587.4-201ENST00000533893 186 ntBASIC3.88□□□□□ -1.79
CLCN3P51790 AC092851.1-201ENST00000535964 478 ntBASIC3.88□□□□□ -1.79
CLCN3P51790 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.88□□□□□ -1.79
CLCN3P51790 AL158063.1-201ENST00000615349 536 ntBASIC3.88□□□□□ -1.79
CLCN3P51790 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLCN3P51790 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLCN3P51790 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.88□□□□□ -1.79
CLCN3P51790 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLCN3P51790 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLCN3P51790 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLCN3P51790 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLCN3P51790 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLCN3P51790 AL022578.1-201ENST00000439330 1433 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 AC092104.1-201ENST00000497346 1441 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLCN3P51790 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CLCN3P51790 AP001486.2-201ENST00000561652 5113 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLCN3P51790 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
CLCN3P51790 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLCN3P51790 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
CLCN3P51790 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CLCN3P51790 RNU6-989P-201ENST00000362756 107 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 RNA5SP322-201ENST00000363617 119 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 RNA5SP267-201ENST00000364893 126 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 RNU1-89P-201ENST00000384592 164 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 HMGN2P8-201ENST00000391458 268 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 RN7SKP266-201ENST00000410232 287 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 RNU2-15P-201ENST00000410692 191 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 BX323014.1-201ENST00000412876 237 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLCN3P51790 AIMP1P1-201ENST00000418670 937 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.87□□□□□ -1.79
CLCN3P51790 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.87□□□□□ -1.79
CLCN3P51790 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.87□□□□□ -1.79
CLCN3P51790 AC005297.2-201ENST00000450430 606 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.87□□□□□ -1.79
CLCN3P51790 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLCN3P51790 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.87□□□□□ -1.79
CLCN3P51790 AL645939.1-201ENST00000453429 797 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.87□□□□□ -1.79
CLCN3P51790 AC104563.1-201ENST00000476147 376 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
CLCN3P51790 AC092045.1-201ENST00000495716 1231 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 MTCYBP43-201ENST00000513621 740 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 RN7SKP83-201ENST00000516512 178 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 RNU6-579P-201ENST00000516879 102 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.87□□□□□ -1.79
CLCN3P51790 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.87□□□□□ -1.79
CLCN3P51790 AC008489.1-201ENST00000524271 483 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.87□□□□□ -1.79
CLCN3P51790 NCAPGP2-201ENST00000557911 754 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.87□□□□□ -1.79
CLCN3P51790 AL353997.4-201ENST00000586196 166 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.87□□□□□ -1.79
CLCN3P51790 AL596245.1-201ENST00000618994 362 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 AC127502.3-201ENST00000636170 1206 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLCN3P51790 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLCN3P51790 MAPK10-373ENST00000641983 6772 ntBASIC3.87□□□□□ -1.79
CLCN3P51790 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLCN3P51790 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLCN3P51790 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLCN3P51790 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
CLCN3P51790 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLCN3P51790 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CLCN3P51790 ZNF833P-201ENST00000424938 1494 ntBASIC3.86□□□□□ -1.79
CLCN3P51790 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLCN3P51790 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.86□□□□□ -1.79
CLCN3P51790 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.86□□□□□ -1.79
CLCN3P51790 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLCN3P51790 RNU4-21P-201ENST00000362802 126 ntBASIC3.86□□□□□ -1.79
CLCN3P51790 RNU6-433P-201ENST00000363216 104 ntBASIC3.86□□□□□ -1.79
CLCN3P51790 RNA5SP42-201ENST00000364278 115 ntBASIC3.86□□□□□ -1.79
CLCN3P51790 U3.39-201ENST00000408569 239 ntBASIC3.86□□□□□ -1.79
CLCN3P51790 RN7SKP56-201ENST00000410513 331 ntBASIC3.86□□□□□ -1.79
CLCN3P51790 RNU6-920P-201ENST00000410926 92 ntBASIC3.86□□□□□ -1.79
CLCN3P51790 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.86□□□□□ -1.79
CLCN3P51790 AC007742.1-201ENST00000425789 329 ntBASIC3.86□□□□□ -1.79
CLCN3P51790 DLGAP5P1-201ENST00000430307 464 ntBASIC3.86□□□□□ -1.79
CLCN3P51790 RPL23AP83-201ENST00000434984 473 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms