Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MFSD8-245ENST00000641743 948 ntBASIC2.69□□□□□ -1.98
CSNK1A1P48729 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
CSNK1A1P48729 AC009487.2-201ENST00000420969 6821 ntBASIC2.69□□□□□ -1.98
CSNK1A1P48729 GDI2P1-201ENST00000429312 1336 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 AL513185.3-201ENST00000433335 1300 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CSNK1A1P48729 HMGB1P5-201ENST00000255320 642 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.68□□□□□ -1.98
CSNK1A1P48729 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CSNK1A1P48729 RNU6-492P-201ENST00000363035 104 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 RNU6-1066P-201ENST00000363573 105 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 U8.9-201ENST00000365667 134 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CSNK1A1P48729 RNU6-657P-201ENST00000383904 107 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 MIR887-201ENST00000401258 79 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 MTCO1P56-201ENST00000401674 224 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 LUZP4P1-201ENST00000415420 344 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.68□□□□□ -1.98
CSNK1A1P48729 AC079780.1-201ENST00000428259 207 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 AC004866.2-201ENST00000438285 481 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.68□□□□□ -1.98
CSNK1A1P48729 AC034236.1-201ENST00000469891 373 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 RN7SL633P-201ENST00000488974 297 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CSNK1A1P48729 PRELID3BP6-201ENST00000503839 571 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 RNU6-1028P-201ENST00000517164 93 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 DEFB130C-202ENST00000530001 230 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.68□□□□□ -1.98
CSNK1A1P48729 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.68□□□□□ -1.98
CSNK1A1P48729 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.68□□□□□ -1.98
CSNK1A1P48729 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.68□□□□□ -1.98
CSNK1A1P48729 BNIP3P33-201ENST00000598912 569 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.68□□□□□ -1.98
CSNK1A1P48729 AC007179.3-201ENST00000604976 235 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 YPEL5P2-201ENST00000605553 359 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 AC093673.2-201ENST00000609674 331 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 AC131902.3-201ENST00000611767 581 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 AC008083.4-201ENST00000615076 444 ntBASIC2.68□□□□□ -1.98
CSNK1A1P48729 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CSNK1A1P48729 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.68□□□□□ -1.98
CSNK1A1P48729 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.68□□□□□ -1.98
CSNK1A1P48729 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.68□□□□□ -1.98
CSNK1A1P48729 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.67□□□□□ -1.98
CSNK1A1P48729 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CSNK1A1P48729 AC073325.2-201ENST00000339545 159 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 ANKRD36P1-201ENST00000344424 659 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 SNORA71.1-201ENST00000364523 117 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 SUGT1P1-201ENST00000379514 476 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 RNU6-1300P-201ENST00000391046 108 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 RNU6-1000P-201ENST00000391066 106 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 AC016769.3-201ENST00000396562 315 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 ARF4P3-201ENST00000397387 509 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CSNK1A1P48729 AL136372.1-201ENST00000403060 228 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.67□□□□□ -1.98
CSNK1A1P48729 MTCO3P1-205ENST00000422088 832 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.67□□□□□ -1.98
CSNK1A1P48729 RPL27AP8-201ENST00000424277 446 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 AL512649.1-201ENST00000428997 581 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 MTND4LP10-201ENST00000435146 291 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 AC093155.1-201ENST00000440164 826 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 AL590639.1-201ENST00000456484 337 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.67□□□□□ -1.98
CSNK1A1P48729 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CSNK1A1P48729 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.67□□□□□ -1.98
CSNK1A1P48729 BOLA3P3-201ENST00000505182 232 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 AC093752.1-206ENST00000511823 336 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.67□□□□□ -1.98
CSNK1A1P48729 RNU6-1095P-201ENST00000516148 108 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 AC007536.1-201ENST00000533382 349 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.67□□□□□ -1.98
CSNK1A1P48729 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.67□□□□□ -1.98
CSNK1A1P48729 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.67□□□□□ -1.98
CSNK1A1P48729 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.67□□□□□ -1.98
CSNK1A1P48729 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.67□□□□□ -1.98
CSNK1A1P48729 AL606834.3-201ENST00000602615 496 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 AC012669.1-201ENST00000603209 283 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 AC091946.2-201ENST00000606105 291 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 AC092954.1-201ENST00000609121 445 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.67□□□□□ -1.98
CSNK1A1P48729 AC096577.2-201ENST00000611455 153 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.67□□□□□ -1.98
CSNK1A1P48729 AL138960.2-201ENST00000625145 535 ntBASIC2.67□□□□□ -1.98
CSNK1A1P48729 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CSNK1A1P48729 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CSNK1A1P48729 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CSNK1A1P48729 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.66□□□□□ -1.98
CSNK1A1P48729 AC011460.1-201ENST00000636268 1834 ntBASIC2.66□□□□□ -1.98
CSNK1A1P48729 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
CSNK1A1P48729 AP003122.5-201ENST00000527668 3766 ntBASIC2.66□□□□□ -1.98
CSNK1A1P48729 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CSNK1A1P48729 RPL23AP57-201ENST00000332361 466 ntBASIC2.66□□□□□ -1.98
CSNK1A1P48729 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CSNK1A1P48729 RNA5SP374-201ENST00000362939 125 ntBASIC2.66□□□□□ -1.98
CSNK1A1P48729 RNA5SP139-201ENST00000364340 117 ntBASIC2.66□□□□□ -1.98
CSNK1A1P48729 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.66□□□□□ -1.98
CSNK1A1P48729 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CSNK1A1P48729 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms