Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.76□□□□□ -2.13
SNCAP37840 Z77249.1-201ENST00000444622 1175 ntBASIC1.76□□□□□ -2.13
SNCAP37840 RPS3P1-201ENST00000456781 192 ntBASIC1.76□□□□□ -2.13
SNCAP37840 AC096992.1-201ENST00000459808 709 ntBASIC1.76□□□□□ -2.13
SNCAP37840 AC096576.1-201ENST00000489014 359 ntBASIC1.76□□□□□ -2.13
SNCAP37840 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.76□□□□□ -2.13
SNCAP37840 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.76□□□□□ -2.13
SNCAP37840 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.76□□□□□ -2.13
SNCAP37840 SNORA26.10-201ENST00000516427 141 ntBASIC1.76□□□□□ -2.13
SNCAP37840 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC1.76□□□□□ -2.13
SNCAP37840 AP001646.1-201ENST00000527936 915 ntBASIC1.76□□□□□ -2.13
SNCAP37840 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.76□□□□□ -2.13
SNCAP37840 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.76□□□□□ -2.13
SNCAP37840 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.76□□□□□ -2.13
SNCAP37840 AC093014.1-201ENST00000548926 724 ntBASIC1.76□□□□□ -2.13
SNCAP37840 AC074029.1-201ENST00000552531 1044 ntBASIC1.76□□□□□ -2.13
SNCAP37840 EIF4BP1-201ENST00000554881 351 ntBASIC1.76□□□□□ -2.13
SNCAP37840 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.76□□□□□ -2.13
SNCAP37840 AL138976.2-201ENST00000563989 694 ntBASIC1.76□□□□□ -2.13
SNCAP37840 AC234778.2-201ENST00000566241 354 ntBASIC1.76□□□□□ -2.13
SNCAP37840 MTCO1P40-201ENST00000574371 625 ntBASIC1.76□□□□□ -2.13
SNCAP37840 OR4K7P-201ENST00000580232 945 ntBASIC1.76□□□□□ -2.13
SNCAP37840 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.76□□□□□ -2.13
SNCAP37840 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SNCAP37840 MIR6076-201ENST00000617521 113 ntBASIC1.76□□□□□ -2.13
SNCAP37840 AC009831.4-201ENST00000620744 325 ntBASIC1.76□□□□□ -2.13
SNCAP37840 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
SNCAP37840 DUXAP9-208ENST00000622815 614 ntBASIC1.76□□□□□ -2.13
SNCAP37840 AC025034.2-201ENST00000623264 286 ntBASIC1.76□□□□□ -2.13
SNCAP37840 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.75□□□□□ -2.13
SNCAP37840 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
SNCAP37840 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SNCAP37840 ANKRD36P1-201ENST00000344424 659 ntBASIC1.75□□□□□ -2.13
SNCAP37840 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
SNCAP37840 RNU6-666P-201ENST00000363499 107 ntBASIC1.75□□□□□ -2.13
SNCAP37840 RNU1-91P-201ENST00000364746 163 ntBASIC1.75□□□□□ -2.13
SNCAP37840 RNU6-317P-201ENST00000384031 107 ntBASIC1.75□□□□□ -2.13
SNCAP37840 MIR483-201ENST00000385070 76 ntBASIC1.75□□□□□ -2.13
SNCAP37840 RPS4XP8-201ENST00000402039 771 ntBASIC1.75□□□□□ -2.13
SNCAP37840 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.75□□□□□ -2.13
SNCAP37840 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.75□□□□□ -2.13
SNCAP37840 RNF19BPX-201ENST00000426224 625 ntBASIC1.75□□□□□ -2.13
SNCAP37840 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.75□□□□□ -2.13
SNCAP37840 UBE2FP3-201ENST00000436366 524 ntBASIC1.75□□□□□ -2.13
SNCAP37840 AL451074.3-201ENST00000437709 472 ntBASIC1.75□□□□□ -2.13
SNCAP37840 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.75□□□□□ -2.13
SNCAP37840 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.75□□□□□ -2.13
SNCAP37840 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SNCAP37840 AL590664.1-201ENST00000448065 339 ntBASIC1.75□□□□□ -2.13
SNCAP37840 AC004924.1-201ENST00000480160 781 ntBASIC1.75□□□□□ -2.13
SNCAP37840 RNU4-29P-201ENST00000515943 174 ntBASIC1.75□□□□□ -2.13
SNCAP37840 MIR514B-201ENST00000516774 80 ntBASIC1.75□□□□□ -2.13
SNCAP37840 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SNCAP37840 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.75□□□□□ -2.13
SNCAP37840 AC126177.3-201ENST00000551839 688 ntBASIC1.75□□□□□ -2.13
SNCAP37840 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.75□□□□□ -2.13
SNCAP37840 AC017100.2-201ENST00000584628 355 ntBASIC1.75□□□□□ -2.13
SNCAP37840 AC009570.1-201ENST00000609599 745 ntBASIC1.75□□□□□ -2.13
SNCAP37840 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.75□□□□□ -2.13
SNCAP37840 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SNCAP37840 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
SNCAP37840 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.74□□□□□ -2.13
SNCAP37840 AC008432.1-201ENST00000615912 1320 ntBASIC1.74□□□□□ -2.13
SNCAP37840 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.74□□□□□ -2.13
SNCAP37840 MIR221-201ENST00000385135 110 ntBASIC1.74□□□□□ -2.13
SNCAP37840 SUMO2P12-201ENST00000405924 140 ntBASIC1.74□□□□□ -2.13
SNCAP37840 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.74□□□□□ -2.13
SNCAP37840 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.74□□□□□ -2.13
SNCAP37840 AC005005.2-201ENST00000420779 380 ntBASIC1.74□□□□□ -2.13
SNCAP37840 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.74□□□□□ -2.13
SNCAP37840 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.74□□□□□ -2.13
SNCAP37840 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.74□□□□□ -2.13
SNCAP37840 AL591719.1-201ENST00000444669 744 ntBASIC1.74□□□□□ -2.13
SNCAP37840 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.74□□□□□ -2.13
SNCAP37840 AC108938.1-201ENST00000451204 136 ntBASIC1.74□□□□□ -2.13
SNCAP37840 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.74□□□□□ -2.13
SNCAP37840 RN7SL274P-201ENST00000492268 272 ntBASIC1.74□□□□□ -2.13
SNCAP37840 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SNCAP37840 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC1.74□□□□□ -2.13
SNCAP37840 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC1.74□□□□□ -2.13
SNCAP37840 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.74□□□□□ -2.13
SNCAP37840 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.74□□□□□ -2.13
SNCAP37840 RNA5SP200-201ENST00000516360 103 ntBASIC1.74□□□□□ -2.13
SNCAP37840 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.74□□□□□ -2.13
SNCAP37840 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.74□□□□□ -2.13
SNCAP37840 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.74□□□□□ -2.13
SNCAP37840 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.74□□□□□ -2.13
SNCAP37840 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.74□□□□□ -2.13
SNCAP37840 AC007938.3-201ENST00000604965 623 ntBASIC1.74□□□□□ -2.13
SNCAP37840 AL033523.1-201ENST00000605153 153 ntBASIC1.74□□□□□ -2.13
SNCAP37840 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.74□□□□□ -2.13
SNCAP37840 AL450472.3-201ENST00000615578 367 ntBASIC1.74□□□□□ -2.13
SNCAP37840 RMST_5.1-201ENST00000618704 126 ntBASIC1.74□□□□□ -2.13
SNCAP37840 AC012640.5-201ENST00000623897 319 ntBASIC1.74□□□□□ -2.13
SNCAP37840 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.74□□□□□ -2.13
SNCAP37840 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SNCAP37840 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
SNCAP37840 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SNCAP37840 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
SNCAP37840 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms