Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 SNORA40.2-201ENST00000390847 128 ntBASIC2.93□□□□□ -1.94
SHMT2P34897 AL450338.1-201ENST00000407987 512 ntBASIC2.93□□□□□ -1.94
SHMT2P34897 RN7SKP58-201ENST00000411010 305 ntBASIC2.93□□□□□ -1.94
SHMT2P34897 BMS1P22-201ENST00000414726 313 ntBASIC2.93□□□□□ -1.94
SHMT2P34897 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.93□□□□□ -1.94
SHMT2P34897 OR4K6P-201ENST00000416478 897 ntBASIC2.93□□□□□ -1.94
SHMT2P34897 Z75741.2-201ENST00000417272 1167 ntBASIC2.93□□□□□ -1.94
SHMT2P34897 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.93□□□□□ -1.94
SHMT2P34897 AC007435.1-201ENST00000421086 415 ntBASIC2.93□□□□□ -1.94
SHMT2P34897 RPL7P46-201ENST00000425129 740 ntBASIC2.93□□□□□ -1.94
SHMT2P34897 RPL21P66-201ENST00000426566 466 ntBASIC2.93□□□□□ -1.94
SHMT2P34897 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.93□□□□□ -1.94
SHMT2P34897 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.93□□□□□ -1.94
SHMT2P34897 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.93□□□□□ -1.94
SHMT2P34897 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.93□□□□□ -1.94
SHMT2P34897 VN1R10P-201ENST00000447106 875 ntBASIC2.93□□□□□ -1.94
SHMT2P34897 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.93□□□□□ -1.94
SHMT2P34897 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.93□□□□□ -1.94
SHMT2P34897 PNPLA4P1-201ENST00000458328 305 ntBASIC2.93□□□□□ -1.94
SHMT2P34897 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.93□□□□□ -1.94
SHMT2P34897 PRELID3BP6-201ENST00000503839 571 ntBASIC2.93□□□□□ -1.94
SHMT2P34897 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.93□□□□□ -1.94
SHMT2P34897 RNU6-27P-201ENST00000516146 107 ntBASIC2.93□□□□□ -1.94
SHMT2P34897 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.93□□□□□ -1.94
SHMT2P34897 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.93□□□□□ -1.94
SHMT2P34897 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SHMT2P34897 AC107016.2-201ENST00000547968 190 ntBASIC2.93□□□□□ -1.94
SHMT2P34897 AC087481.2-201ENST00000565492 330 ntBASIC2.93□□□□□ -1.94
SHMT2P34897 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.93□□□□□ -1.94
SHMT2P34897 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.93□□□□□ -1.94
SHMT2P34897 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.93□□□□□ -1.94
SHMT2P34897 AL158163.2-201ENST00000619110 700 ntBASIC2.93□□□□□ -1.94
SHMT2P34897 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.93□□□□□ -1.94
SHMT2P34897 CYP3A51P-201ENST00000633513 256 ntBASIC2.93□□□□□ -1.94
SHMT2P34897 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SHMT2P34897 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.93□□□□□ -1.94
SHMT2P34897 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SHMT2P34897 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SHMT2P34897 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SHMT2P34897 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SHMT2P34897 AC073325.2-201ENST00000339545 159 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.92□□□□□ -1.94
SHMT2P34897 RNU6-1181P-201ENST00000384191 106 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.92□□□□□ -1.94
SHMT2P34897 RNU6-712P-201ENST00000410558 100 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.92□□□□□ -1.94
SHMT2P34897 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.92□□□□□ -1.94
SHMT2P34897 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.92□□□□□ -1.94
SHMT2P34897 RPL21P40-201ENST00000428586 483 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.92□□□□□ -1.94
SHMT2P34897 MTCO1P53-201ENST00000441633 699 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 AC140076.1-201ENST00000449897 361 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.92□□□□□ -1.94
SHMT2P34897 RPL21P41-201ENST00000459863 264 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 AC092757.1-201ENST00000467293 467 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 RN7SL20P-201ENST00000488827 297 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SHMT2P34897 AC113420.1-201ENST00000507903 571 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.92□□□□□ -1.94
SHMT2P34897 RN7SKP43-201ENST00000516173 320 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 RNA5SP76-201ENST00000516277 87 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 AC087808.1-201ENST00000520501 361 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.92□□□□□ -1.94
SHMT2P34897 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.92□□□□□ -1.94
SHMT2P34897 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.92□□□□□ -1.94
SHMT2P34897 EEF1B2P4-201ENST00000551398 348 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.92□□□□□ -1.94
SHMT2P34897 AL133393.1-201ENST00000603277 287 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 AL158050.2-201ENST00000605336 568 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 AC024257.5-201ENST00000612739 531 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 CYCSP41-201ENST00000616920 296 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 AL121895.2-201ENST00000619558 447 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 AC018755.4-201ENST00000619715 454 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 AC009269.6-201ENST00000621778 588 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 AC073348.1-201ENST00000623002 331 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 OR1S1-201ENST00000624470 978 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.92□□□□□ -1.94
SHMT2P34897 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SHMT2P34897 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.92□□□□□ -1.94
SHMT2P34897 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SHMT2P34897 AL355596.1-201ENST00000565399 3996 ntBASIC2.92□□□□□ -1.94
SHMT2P34897 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SHMT2P34897 AL049780.3-201ENST00000624612 1583 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SHMT2P34897 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
SHMT2P34897 Y_RNA.25-201ENST00000362528 102 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 Y_RNA.472-201ENST00000384322 102 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 MIR128-1-201ENST00000384921 82 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 MIR620-201ENST00000385232 95 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 AC096664.2-201ENST00000411843 406 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 AL161449.1-201ENST00000414531 1199 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.91□□□□□ -1.94
SHMT2P34897 AC022018.1-201ENST00000430685 241 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 AL590103.1-201ENST00000434488 307 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 USP9YP22-201ENST00000438971 294 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 AL358794.1-201ENST00000445689 381 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.91□□□□□ -1.94
SHMT2P34897 AC104308.1-201ENST00000454621 333 ntBASIC2.91□□□□□ -1.94
SHMT2P34897 S100A11P2-201ENST00000467589 312 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms