Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 SNORA38.1-201ENST00000364172 131 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 U3.29-201ENST00000391296 212 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 RNA5SP129-201ENST00000410276 118 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 RNU6-712P-201ENST00000410558 100 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXC8P31273 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXC8P31273 AL390023.1-201ENST00000428836 262 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 MTND4P6-201ENST00000438297 472 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 AL117351.1-201ENST00000438864 766 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXC8P31273 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC8P31273 MTND2P4-201ENST00000445034 1004 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXC8P31273 RPS27AP8-201ENST00000452665 445 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 MTCO3P11-201ENST00000455103 774 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 HMGN2P7-201ENST00000456186 273 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 snoU13.4-201ENST00000458916 104 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 MTND1P16-201ENST00000465177 898 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 ST13P14-201ENST00000474095 734 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 AL024509.2-201ENST00000493462 493 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HOXC8P31273 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXC8P31273 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC8P31273 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC8P31273 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC8P31273 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXC8P31273 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.79□□□□□ -1.8
HOXC8P31273 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXC8P31273 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC8P31273 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC8P31273 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXC8P31273 UBE2NP1-201ENST00000545592 458 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXC8P31273 AC126177.3-201ENST00000551839 688 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.79□□□□□ -1.8
HOXC8P31273 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXC8P31273 MIR5680-201ENST00000577577 84 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 MIR4637-201ENST00000582405 84 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 MIR4999-201ENST00000585029 91 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXC8P31273 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXC8P31273 AC146944.4-201ENST00000602697 718 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 AL606834.2-201ENST00000602954 668 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 XIAPP1-201ENST00000603162 600 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 BNIP3P11-201ENST00000603878 563 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 AC243773.3-201ENST00000613270 256 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HOXC8P31273 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 AL607023.1-201ENST00000620045 248 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXC8P31273 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
HOXC8P31273 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXC8P31273 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXC8P31273 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HOXC8P31273 AC005539.1-201ENST00000443768 1479 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 OTUD4P1-201ENST00000237841 3067 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 Z83843.1-201ENST00000604070 3685 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXC8P31273 ELL2P3-201ENST00000457883 1602 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 AF127577.6-201ENST00000623352 2191 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXC8P31273 RNU6-283P-201ENST00000364788 107 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 RNU6-1200P-201ENST00000384162 107 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXC8P31273 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC8P31273 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC8P31273 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC8P31273 AL049610.1-201ENST00000423374 372 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 AC019178.2-201ENST00000423595 505 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC8P31273 PSMA6P3-201ENST00000428242 164 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.78□□□□□ -1.8
HOXC8P31273 AC118469.1-201ENST00000442943 488 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC8P31273 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXC8P31273 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC8P31273 SLC31A1P1-201ENST00000451221 567 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 DNAJC19P1-201ENST00000455312 319 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 AC026410.2-201ENST00000460281 156 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.78□□□□□ -1.8
HOXC8P31273 FAM172BP-201ENST00000487497 1089 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC8P31273 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXC8P31273 AC114981.1-201ENST00000503897 678 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC8P31273 USP9YP5-201ENST00000511770 630 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 OR5BM1P-201ENST00000512021 366 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 AC117532.1-201ENST00000514638 323 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 SCARNA13-201ENST00000516672 275 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 AC105185.1-201ENST00000518705 535 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 AP000889.1-201ENST00000530968 660 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 AC026333.2-201ENST00000542164 106 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXC8P31273 AC005476.1-201ENST00000554427 397 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXC8P31273 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.78□□□□□ -1.8
HOXC8P31273 ZNF192P1-203ENST00000565888 810 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 LARP7P2-201ENST00000575306 125 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 AC090616.2-202ENST00000584248 222 ntBASIC3.78□□□□□ -1.8
HOXC8P31273 AL139395.1-201ENST00000603662 160 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms