Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AMD1P2-201ENST00000412936 992 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 OR5BE1P-201ENST00000425977 939 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.75□□□□□ -1.81
ABCD3P28288 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.75□□□□□ -1.81
ABCD3P28288 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.75□□□□□ -1.81
ABCD3P28288 AL162151.2-201ENST00000448875 158 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 AL162389.1-201ENST00000449233 177 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.75□□□□□ -1.81
ABCD3P28288 NUTF2P7-201ENST00000453086 375 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 AC108059.3-201ENST00000456388 214 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 AC103987.1-201ENST00000473394 348 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
ABCD3P28288 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.75□□□□□ -1.81
ABCD3P28288 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.75□□□□□ -1.81
ABCD3P28288 RN7SKP13-201ENST00000515933 244 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 MIR2114-201ENST00000516645 80 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 MIR2116-201ENST00000517221 80 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
ABCD3P28288 ZNF519P3-201ENST00000557158 1032 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 AL133153.1-201ENST00000557756 303 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.75□□□□□ -1.81
ABCD3P28288 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.75□□□□□ -1.81
ABCD3P28288 AC055876.1-202ENST00000567053 138 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 AL356432.3-201ENST00000568952 465 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 AC006116.10-201ENST00000591836 581 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.75□□□□□ -1.81
ABCD3P28288 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.75□□□□□ -1.81
ABCD3P28288 U73023.1-201ENST00000603134 700 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 AC068276.1-201ENST00000605793 379 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 HMGB1P50-201ENST00000605814 607 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 AL355472.4-201ENST00000610233 626 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 AC138749.5-201ENST00000611461 208 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 AC024941.1-201ENST00000612250 334 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 AC008121.2-201ENST00000614647 523 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
ABCD3P28288 AC116165.2-201ENST00000616705 206 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 AC009159.1-201ENST00000618386 642 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.75□□□□□ -1.81
ABCD3P28288 AC010149.2-201ENST00000637608 315 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 OR5BE1P-202ENST00000641168 1176 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
ABCD3P28288 AC090740.1-201ENST00000623193 2262 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
ABCD3P28288 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
ABCD3P28288 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
ABCD3P28288 RLIMP1-201ENST00000339626 1680 ntBASIC3.75□□□□□ -1.81
ABCD3P28288 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.74□□□□□ -1.81
ABCD3P28288 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.74□□□□□ -1.81
ABCD3P28288 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ABCD3P28288 SPRR2C-201ENST00000290702 219 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 RNU5A-1-201ENST00000362698 116 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 Y_RNA.77-201ENST00000362962 107 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 SNORD116-9-201ENST00000384000 95 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 SNORD116-3-201ENST00000384287 95 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 SNORD116-7-201ENST00000384404 95 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 SNORD116-5-201ENST00000384462 95 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 SNORA37-201ENST00000384504 129 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 CCNG1P1-201ENST00000406783 885 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.74□□□□□ -1.81
ABCD3P28288 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.74□□□□□ -1.81
ABCD3P28288 OR4C10P-201ENST00000434991 931 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.74□□□□□ -1.81
ABCD3P28288 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
ABCD3P28288 SNORA71B-202ENST00000439232 272 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ABCD3P28288 SNRPGP9-201ENST00000456025 225 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.74□□□□□ -1.81
ABCD3P28288 RNA5SP269-201ENST00000459032 137 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 HSPE1P6-201ENST00000479457 291 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ABCD3P28288 AC004069.2-201ENST00000505438 1114 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 HMGB3P15-201ENST00000507326 574 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 AC105313.1-201ENST00000509121 353 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 AC109464.2-201ENST00000510242 943 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.74□□□□□ -1.81
ABCD3P28288 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.74□□□□□ -1.81
ABCD3P28288 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.74□□□□□ -1.81
ABCD3P28288 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.74□□□□□ -1.81
ABCD3P28288 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.74□□□□□ -1.81
ABCD3P28288 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.74□□□□□ -1.81
ABCD3P28288 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.74□□□□□ -1.81
ABCD3P28288 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.74□□□□□ -1.81
ABCD3P28288 AC008489.1-201ENST00000524271 483 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 AP001804.3-201ENST00000525146 880 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 AC022878.1-201ENST00000530684 149 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ABCD3P28288 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.74□□□□□ -1.81
ABCD3P28288 AC007224.1-201ENST00000564410 144 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 AL360157.1-201ENST00000565962 87 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.74□□□□□ -1.81
ABCD3P28288 AC007599.1-201ENST00000568688 1174 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 RPL23AP84-201ENST00000571193 464 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 AC112191.3-201ENST00000604371 277 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 AC121334.2-201ENST00000605387 271 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ABCD3P28288 AC090970.3-201ENST00000612566 866 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.74□□□□□ -1.81
ABCD3P28288 TUG1_2.1-201ENST00000614234 87 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 AL110115.1-201ENST00000614396 364 ntBASIC3.74□□□□□ -1.81
ABCD3P28288 AL158063.1-201ENST00000615349 536 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms