Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
POLR2AP24928 AL133384.1-201ENST00000412744 351 ntBASIC4.41□□□□□ -1.7
POLR2AP24928 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
POLR2AP24928 ZNF90P2-204ENST00000419323 1075 ntBASIC4.41□□□□□ -1.7
POLR2AP24928 AL034379.1-201ENST00000423216 253 ntBASIC4.41□□□□□ -1.7
POLR2AP24928 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.41□□□□□ -1.7
POLR2AP24928 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.41□□□□□ -1.7
POLR2AP24928 IFNA20P-201ENST00000436840 528 ntBASIC4.41□□□□□ -1.7
POLR2AP24928 NPM1P39-201ENST00000449818 867 ntBASIC4.41□□□□□ -1.7
POLR2AP24928 AL590365.1-201ENST00000450788 243 ntBASIC4.41□□□□□ -1.7
POLR2AP24928 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.41□□□□□ -1.7
POLR2AP24928 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.41□□□□□ -1.7
POLR2AP24928 RPL23AP94-201ENST00000512518 302 ntBASIC4.41□□□□□ -1.7
POLR2AP24928 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.41□□□□□ -1.7
POLR2AP24928 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.41□□□□□ -1.7
POLR2AP24928 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.41□□□□□ -1.7
POLR2AP24928 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.41□□□□□ -1.7
POLR2AP24928 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.41□□□□□ -1.7
POLR2AP24928 MIR3167-201ENST00000579623 85 ntBASIC4.41□□□□□ -1.7
POLR2AP24928 AC005261.5-201ENST00000596280 355 ntBASIC4.41□□□□□ -1.7
POLR2AP24928 AC091488.1-201ENST00000604239 660 ntBASIC4.41□□□□□ -1.7
POLR2AP24928 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.41□□□□□ -1.7
POLR2AP24928 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
POLR2AP24928 AL022311.1-201ENST00000623726 19416 ntBASIC4.41□□□□□ -1.7
POLR2AP24928 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
POLR2AP24928 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
POLR2AP24928 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
POLR2AP24928 AC138915.3-201ENST00000562908 1389 ntBASIC4.41□□□□□ -1.7
POLR2AP24928 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
POLR2AP24928 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
POLR2AP24928 RNF6P1-201ENST00000444889 1784 ntBASIC4.41□□□□□ -1.7
POLR2AP24928 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
POLR2AP24928 GVINP1-202ENST00000531871 7271 ntBASIC4.4□□□□□ -1.7
POLR2AP24928 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.4□□□□□ -1.7
POLR2AP24928 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
POLR2AP24928 RPL23AP57-201ENST00000332361 466 ntBASIC4.4□□□□□ -1.7
POLR2AP24928 MIR199A2-201ENST00000385289 110 ntBASIC4.4□□□□□ -1.7
POLR2AP24928 RPL7AP73-201ENST00000413490 353 ntBASIC4.4□□□□□ -1.7
POLR2AP24928 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.4□□□□□ -1.7
POLR2AP24928 AF228730.4-201ENST00000421457 183 ntBASIC4.4□□□□□ -1.7
POLR2AP24928 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.4□□□□□ -1.7
POLR2AP24928 AC097713.2-201ENST00000430199 356 ntBASIC4.4□□□□□ -1.7
POLR2AP24928 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.4□□□□□ -1.7
POLR2AP24928 RPL7P48-201ENST00000461513 746 ntBASIC4.4□□□□□ -1.7
POLR2AP24928 TRBV8-2-201ENST00000475637 270 ntBASIC4.4□□□□□ -1.7
POLR2AP24928 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.4□□□□□ -1.7
POLR2AP24928 AC087276.1-201ENST00000529659 480 ntBASIC4.4□□□□□ -1.7
POLR2AP24928 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.4□□□□□ -1.7
POLR2AP24928 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.4□□□□□ -1.7
POLR2AP24928 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.4□□□□□ -1.7
POLR2AP24928 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.4□□□□□ -1.7
POLR2AP24928 AC090751.1-201ENST00000566966 267 ntBASIC4.4□□□□□ -1.7
POLR2AP24928 AC068880.5-201ENST00000624331 290 ntBASIC4.4□□□□□ -1.7
POLR2AP24928 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.4□□□□□ -1.7
POLR2AP24928 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
POLR2AP24928 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
POLR2AP24928 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
POLR2AP24928 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
POLR2AP24928 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
POLR2AP24928 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
POLR2AP24928 AC119744.1-201ENST00000454746 1715 ntBASIC4.4□□□□□ -1.71
POLR2AP24928 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.4□□□□□ -1.71
POLR2AP24928 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.4□□□□□ -1.71
POLR2AP24928 AL022322.2-201ENST00000624072 20397 ntBASIC4.4□□□□□ -1.71
POLR2AP24928 DDX18P4-201ENST00000511690 1966 ntBASIC4.4□□□□□ -1.71
POLR2AP24928 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
POLR2AP24928 FAT1P1-201ENST00000406588 507 ntBASIC4.4□□□□□ -1.71
POLR2AP24928 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.4□□□□□ -1.71
POLR2AP24928 AL589872.1-201ENST00000426602 288 ntBASIC4.4□□□□□ -1.71
POLR2AP24928 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.4□□□□□ -1.71
POLR2AP24928 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.4□□□□□ -1.71
POLR2AP24928 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.4□□□□□ -1.71
POLR2AP24928 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.4□□□□□ -1.71
POLR2AP24928 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.4□□□□□ -1.71
POLR2AP24928 MTCYBP17-201ENST00000503579 789 ntBASIC4.4□□□□□ -1.71
POLR2AP24928 RN7SKP96-201ENST00000516948 297 ntBASIC4.4□□□□□ -1.71
POLR2AP24928 AL389895.1-201ENST00000554127 252 ntBASIC4.4□□□□□ -1.71
POLR2AP24928 RPL21P7-201ENST00000557463 483 ntBASIC4.4□□□□□ -1.71
POLR2AP24928 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.4□□□□□ -1.71
POLR2AP24928 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.4□□□□□ -1.71
POLR2AP24928 AC012507.3-201ENST00000603556 477 ntBASIC4.4□□□□□ -1.71
POLR2AP24928 AC090525.3-201ENST00000605601 189 ntBASIC4.4□□□□□ -1.71
POLR2AP24928 AC010338.1-201ENST00000621823 717 ntBASIC4.4□□□□□ -1.71
POLR2AP24928 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
POLR2AP24928 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
POLR2AP24928 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
POLR2AP24928 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
POLR2AP24928 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.39□□□□□ -1.71
POLR2AP24928 AC006026.1-201ENST00000444025 1803 ntBASIC4.39□□□□□ -1.71
POLR2AP24928 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
POLR2AP24928 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
POLR2AP24928 RNU6-433P-201ENST00000363216 104 ntBASIC4.39□□□□□ -1.71
POLR2AP24928 RNU6-1279P-201ENST00000383917 103 ntBASIC4.39□□□□□ -1.71
POLR2AP24928 RPL31P1-201ENST00000398116 372 ntBASIC4.39□□□□□ -1.71
POLR2AP24928 MIR1289-1-201ENST00000408836 144 ntBASIC4.39□□□□□ -1.71
POLR2AP24928 RNU4-55P-201ENST00000410731 137 ntBASIC4.39□□□□□ -1.71
POLR2AP24928 RNU6-195P-201ENST00000411352 109 ntBASIC4.39□□□□□ -1.71
POLR2AP24928 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.39□□□□□ -1.71
POLR2AP24928 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.39□□□□□ -1.71
POLR2AP24928 AL136133.1-201ENST00000413694 376 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms