Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC098862.1-201ENST00000504991 413 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
COL5A1P20908 RNU5A-7P-201ENST00000515979 116 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.33□□□□□ -2.04
COL5A1P20908 AP001317.1-201ENST00000531194 960 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
COL5A1P20908 MTND1P8-201ENST00000571424 950 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 MIR4509-3-201ENST00000578671 94 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 CBX3P2-202ENST00000583365 535 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 MIR4509-2-201ENST00000583920 94 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
COL5A1P20908 AC013244.3-201ENST00000605614 388 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 AC027449.1-201ENST00000608890 407 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 AC009570.1-201ENST00000609599 745 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 AC008759.3-201ENST00000613300 508 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
COL5A1P20908 MIR4509-1-201ENST00000618224 94 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 AC084824.4-201ENST00000620106 731 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 AC048347.1-201ENST00000624621 427 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 AL356118.1-201ENST00000635272 1078 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 AC099654.8-201ENST00000637757 681 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
COL5A1P20908 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
COL5A1P20908 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
COL5A1P20908 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.32□□□□□ -2.04
COL5A1P20908 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.32□□□□□ -2.04
COL5A1P20908 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
COL5A1P20908 AC010329.2-201ENST00000595195 2737 ntBASIC2.32□□□□□ -2.04
COL5A1P20908 Y_RNA.796-201ENST00000364268 102 ntBASIC2.32□□□□□ -2.04
COL5A1P20908 Y_RNA.799-201ENST00000364992 102 ntBASIC2.32□□□□□ -2.04
COL5A1P20908 AL355615.1-201ENST00000406187 641 ntBASIC2.32□□□□□ -2.04
COL5A1P20908 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.32□□□□□ -2.04
COL5A1P20908 AL513175.2-201ENST00000422071 443 ntBASIC2.32□□□□□ -2.04
COL5A1P20908 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.32□□□□□ -2.04
COL5A1P20908 AC022022.1-201ENST00000430304 178 ntBASIC2.32□□□□□ -2.04
COL5A1P20908 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.32□□□□□ -2.04
COL5A1P20908 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.32□□□□□ -2.04
COL5A1P20908 ELOCP11-201ENST00000436690 332 ntBASIC2.32□□□□□ -2.04
COL5A1P20908 RNFT1P2-201ENST00000443064 757 ntBASIC2.32□□□□□ -2.04
COL5A1P20908 ELOCP16-201ENST00000444494 332 ntBASIC2.32□□□□□ -2.04
COL5A1P20908 AC021146.7-201ENST00000509604 775 ntBASIC2.32□□□□□ -2.04
COL5A1P20908 AC108120.2-201ENST00000512973 294 ntBASIC2.32□□□□□ -2.04
COL5A1P20908 RNA5SP309-201ENST00000516670 106 ntBASIC2.32□□□□□ -2.04
COL5A1P20908 AC004923.2-201ENST00000529649 369 ntBASIC2.32□□□□□ -2.04
COL5A1P20908 AC021269.2-201ENST00000532318 330 ntBASIC2.32□□□□□ -2.04
COL5A1P20908 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.32□□□□□ -2.04
COL5A1P20908 CLIC4P2-201ENST00000601934 717 ntBASIC2.32□□□□□ -2.04
COL5A1P20908 RPP40P2-201ENST00000603596 712 ntBASIC2.32□□□□□ -2.04
COL5A1P20908 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.32□□□□□ -2.04
COL5A1P20908 AP003117.2-201ENST00000606010 545 ntBASIC2.32□□□□□ -2.04
COL5A1P20908 AC099654.9-201ENST00000637055 678 ntBASIC2.32□□□□□ -2.04
COL5A1P20908 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
COL5A1P20908 AC005539.1-201ENST00000443768 1479 ntBASIC2.32□□□□□ -2.04
COL5A1P20908 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
COL5A1P20908 AC091152.2-201ENST00000591628 2569 ntBASIC2.32□□□□□ -2.04
COL5A1P20908 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL5A1P20908 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.31□□□□□ -2.04
COL5A1P20908 SEPT7P7-201ENST00000420492 1301 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 FRG1BP-201ENST00000278882 761 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 RNU6-481P-201ENST00000384194 107 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 AL158050.1-201ENST00000416077 457 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 AL096701.2-201ENST00000416920 238 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 RPL31P45-201ENST00000419532 356 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 VN1R42P-201ENST00000424651 344 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 AC114973.1-201ENST00000429057 632 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 MTCYBP12-201ENST00000440559 1134 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 COX6CP2-201ENST00000444980 225 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.31□□□□□ -2.04
COL5A1P20908 TRBV1-201ENST00000476502 284 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 RPL9P6-201ENST00000492764 598 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 RPS27P27-201ENST00000498779 255 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.31□□□□□ -2.04
COL5A1P20908 NAMPTP2-201ENST00000505629 1115 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 AC114322.1-201ENST00000506771 926 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 MTND4P2-201ENST00000507767 1203 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 AC112518.2-201ENST00000508565 425 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.31□□□□□ -2.04
COL5A1P20908 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.31□□□□□ -2.04
COL5A1P20908 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
COL5A1P20908 AC108729.3-201ENST00000513484 108 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.31□□□□□ -2.04
COL5A1P20908 AC112198.4-201ENST00000515450 351 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.31□□□□□ -2.04
COL5A1P20908 SCARNA17.1-201ENST00000516211 143 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 SCARNA17.2-201ENST00000516334 143 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.31□□□□□ -2.04
COL5A1P20908 OR8X1P-201ENST00000534542 869 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.31□□□□□ -2.04
COL5A1P20908 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.31□□□□□ -2.04
COL5A1P20908 MTATP6P24-201ENST00000576835 677 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.31□□□□□ -2.04
COL5A1P20908 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.31□□□□□ -2.04
COL5A1P20908 AL121652.1-201ENST00000608851 448 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 AP001033.2-201ENST00000609701 1003 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 SCARNA17.4-201ENST00000614296 143 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 MIR8070-201ENST00000616510 88 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 AC002076.2-201ENST00000617362 122 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 AC073348.1-201ENST00000623002 331 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 AL590396.4-201ENST00000636779 956 ntBASIC2.31□□□□□ -2.04
COL5A1P20908 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms