Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 HMGB1P13-201ENST00000406019 642 ntBASIC3.03□□□□□ -1.92
TOP2AP11388 MIR1323-201ENST00000408090 73 ntBASIC3.03□□□□□ -1.92
TOP2AP11388 AP000275.1-201ENST00000411943 390 ntBASIC3.03□□□□□ -1.92
TOP2AP11388 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.03□□□□□ -1.92
TOP2AP11388 USP9YP10-201ENST00000454868 628 ntBASIC3.03□□□□□ -1.92
TOP2AP11388 AC087190.1-201ENST00000484462 480 ntBASIC3.03□□□□□ -1.92
TOP2AP11388 AL163540.1-201ENST00000485382 386 ntBASIC3.03□□□□□ -1.92
TOP2AP11388 RPL36AP21-201ENST00000490372 323 ntBASIC3.03□□□□□ -1.92
TOP2AP11388 MTND5P4-201ENST00000514978 288 ntBASIC3.03□□□□□ -1.92
TOP2AP11388 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.03□□□□□ -1.92
TOP2AP11388 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.03□□□□□ -1.92
TOP2AP11388 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
TOP2AP11388 Y_RNA.508-201ENST00000384502 114 ntBASIC3.02□□□□□ -1.93
TOP2AP11388 RPS7P9-201ENST00000414704 586 ntBASIC3.02□□□□□ -1.93
TOP2AP11388 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TOP2AP11388 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.02□□□□□ -1.93
TOP2AP11388 PTGES3P5-201ENST00000455109 434 ntBASIC3.02□□□□□ -1.93
TOP2AP11388 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.02□□□□□ -1.93
TOP2AP11388 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
TOP2AP11388 SEPT7P7-201ENST00000420492 1301 ntBASIC3.02□□□□□ -1.93
TOP2AP11388 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TOP2AP11388 API5P2-201ENST00000397055 1498 ntBASIC3.01□□□□□ -1.93
TOP2AP11388 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TOP2AP11388 AC009302.1-201ENST00000417147 390 ntBASIC3.01□□□□□ -1.93
TOP2AP11388 RPS15AP12-201ENST00000419498 388 ntBASIC3.01□□□□□ -1.93
TOP2AP11388 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.01□□□□□ -1.93
TOP2AP11388 AC006483.1-201ENST00000487308 313 ntBASIC3.01□□□□□ -1.93
TOP2AP11388 MTCYBP17-201ENST00000503579 789 ntBASIC3.01□□□□□ -1.93
TOP2AP11388 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.01□□□□□ -1.93
TOP2AP11388 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.01□□□□□ -1.93
TOP2AP11388 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.01□□□□□ -1.93
TOP2AP11388 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.01□□□□□ -1.93
TOP2AP11388 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.01□□□□□ -1.93
TOP2AP11388 AC024560.3-201ENST00000608482 349 ntBASIC3.01□□□□□ -1.93
TOP2AP11388 AC010872.1-201ENST00000624225 675 ntBASIC3.01□□□□□ -1.93
TOP2AP11388 AP000553.5-201ENST00000641933 54 ntBASIC3.01□□□□□ -1.93
TOP2AP11388 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3□□□□□ -1.93
TOP2AP11388 AL139276.1-201ENST00000311910 1001 ntBASIC3□□□□□ -1.93
TOP2AP11388 NCSTNP1-201ENST00000406229 144 ntBASIC3□□□□□ -1.93
TOP2AP11388 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3□□□□□ -1.93
TOP2AP11388 RPL7P46-201ENST00000425129 740 ntBASIC3□□□□□ -1.93
TOP2AP11388 AC009414.1-201ENST00000427200 443 ntBASIC3□□□□□ -1.93
TOP2AP11388 AL645568.3-201ENST00000433683 316 ntBASIC3□□□□□ -1.93
TOP2AP11388 RPL23AP58-201ENST00000440453 469 ntBASIC3□□□□□ -1.93
TOP2AP11388 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3□□□□□ -1.93
TOP2AP11388 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3□□□□□ -1.93
TOP2AP11388 AC124283.4-201ENST00000581815 456 ntBASIC3□□□□□ -1.93
TOP2AP11388 AC103987.3-201ENST00000582071 292 ntBASIC3□□□□□ -1.93
TOP2AP11388 AL035411.2-201ENST00000604022 421 ntBASIC3□□□□□ -1.93
TOP2AP11388 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3□□□□□ -1.93
TOP2AP11388 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
TOP2AP11388 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3□□□□□ -1.93
TOP2AP11388 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.99□□□□□ -1.93
TOP2AP11388 AL138799.3-201ENST00000438968 350 ntBASIC2.99□□□□□ -1.93
TOP2AP11388 SSXP1-201ENST00000453640 473 ntBASIC2.99□□□□□ -1.93
TOP2AP11388 BX322784.1-201ENST00000455793 1077 ntBASIC2.99□□□□□ -1.93
TOP2AP11388 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.99□□□□□ -1.93
TOP2AP11388 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.99□□□□□ -1.93
TOP2AP11388 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.99□□□□□ -1.93
TOP2AP11388 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.99□□□□□ -1.93
TOP2AP11388 ISCA1P3-201ENST00000577104 373 ntBASIC2.99□□□□□ -1.93
TOP2AP11388 AL645939.4-201ENST00000604495 135 ntBASIC2.99□□□□□ -1.93
TOP2AP11388 MIR502-201ENST00000606349 86 ntBASIC2.99□□□□□ -1.93
TOP2AP11388 AL590099.1-201ENST00000615276 138 ntBASIC2.99□□□□□ -1.93
TOP2AP11388 AL589994.2-201ENST00000621124 579 ntBASIC2.99□□□□□ -1.93
TOP2AP11388 Y_RNA.796-201ENST00000364268 102 ntBASIC2.98□□□□□ -1.93
TOP2AP11388 SNORA16.1-201ENST00000364597 132 ntBASIC2.98□□□□□ -1.93
TOP2AP11388 Y_RNA.269-201ENST00000364685 89 ntBASIC2.98□□□□□ -1.93
TOP2AP11388 Y_RNA.799-201ENST00000364992 102 ntBASIC2.98□□□□□ -1.93
TOP2AP11388 RNA5SP138-201ENST00000365098 114 ntBASIC2.98□□□□□ -1.93
TOP2AP11388 USP9YP27-201ENST00000418455 438 ntBASIC2.98□□□□□ -1.93
TOP2AP11388 AL109741.2-201ENST00000455561 343 ntBASIC2.98□□□□□ -1.93
TOP2AP11388 AC117532.1-201ENST00000514638 323 ntBASIC2.98□□□□□ -1.93
TOP2AP11388 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC2.98□□□□□ -1.93
TOP2AP11388 AF127577.6-201ENST00000623352 2191 ntBASIC2.98□□□□□ -1.93
TOP2AP11388 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
TOP2AP11388 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.98□□□□□ -1.93
TOP2AP11388 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.98□□□□□ -1.93
TOP2AP11388 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.98□□□□□ -1.93
TOP2AP11388 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.98□□□□□ -1.93
TOP2AP11388 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.98□□□□□ -1.93
TOP2AP11388 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.98□□□□□ -1.93
TOP2AP11388 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.98□□□□□ -1.93
TOP2AP11388 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.98□□□□□ -1.93
TOP2AP11388 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.98□□□□□ -1.93
TOP2AP11388 AC138649.5-201ENST00000637456 137 ntBASIC2.98□□□□□ -1.93
TOP2AP11388 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TOP2AP11388 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TOP2AP11388 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.97□□□□□ -1.93
TOP2AP11388 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TOP2AP11388 Z98749.2-208ENST00000381646 500 ntBASIC2.97□□□□□ -1.93
TOP2AP11388 SEC63P1-201ENST00000425785 1258 ntBASIC2.97□□□□□ -1.93
TOP2AP11388 AL353597.2-202ENST00000434901 373 ntBASIC2.97□□□□□ -1.93
TOP2AP11388 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.97□□□□□ -1.93
TOP2AP11388 AC078918.1-201ENST00000498515 228 ntBASIC2.97□□□□□ -1.93
TOP2AP11388 ARL4AP2-201ENST00000507378 601 ntBASIC2.97□□□□□ -1.93
TOP2AP11388 RNA5SP445-201ENST00000515889 115 ntBASIC2.97□□□□□ -1.93
TOP2AP11388 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.97□□□□□ -1.93
TOP2AP11388 uc_338.5-201ENST00000611839 155 ntBASIC2.97□□□□□ -1.93
TOP2AP11388 HPVC1-201ENST00000629899 1198 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms