Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 SNORA41-201ENST00000384675 132 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 RNVU1-14-201ENST00000384770 164 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 U3.29-201ENST00000391296 212 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 UBA52P6-201ENST00000399822 382 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 AL136372.1-201ENST00000403060 228 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 RNU6-272P-201ENST00000411028 104 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CXCL1P09341 COTL1P1-201ENST00000422309 375 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 MTCO1P39-201ENST00000426148 480 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 AC234781.2-201ENST00000426370 994 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 AL365496.1-201ENST00000426885 215 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 SRIP2-201ENST00000428470 166 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC1.86□□□□□ -2.11
CXCL1P09341 AC015724.1-201ENST00000478577 156 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 RPL23AP70-201ENST00000483361 460 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 RPL23AP49-201ENST00000492925 468 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 NAMPTP2-201ENST00000505629 1115 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 CBX3P3-201ENST00000508108 532 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC1.86□□□□□ -2.11
CXCL1P09341 AC006445.2-201ENST00000510061 472 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 RNU6-202P-201ENST00000515998 96 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.86□□□□□ -2.11
CXCL1P09341 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.86□□□□□ -2.11
CXCL1P09341 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.86□□□□□ -2.11
CXCL1P09341 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.86□□□□□ -2.11
CXCL1P09341 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.86□□□□□ -2.11
CXCL1P09341 AC009268.1-201ENST00000561352 1203 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.86□□□□□ -2.11
CXCL1P09341 AC061975.8-201ENST00000587058 721 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 AL035413.2-201ENST00000604801 525 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 AC093732.2-201ENST00000607950 274 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 AL160394.1-201ENST00000624765 724 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.86□□□□□ -2.11
CXCL1P09341 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CXCL1P09341 SDAD1P2-201ENST00000441308 2028 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CXCL1P09341 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.86□□□□□ -2.11
CXCL1P09341 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CXCL1P09341 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.85□□□□□ -2.11
CXCL1P09341 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
CXCL1P09341 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CXCL1P09341 RNU4-23P-201ENST00000362839 140 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.85□□□□□ -2.11
CXCL1P09341 RNU6-444P-201ENST00000383988 108 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 MIR134-201ENST00000385258 73 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 RNU6-193P-201ENST00000410977 107 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.85□□□□□ -2.11
CXCL1P09341 AL158825.1-201ENST00000414735 521 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 UBE2V1P9-201ENST00000414760 368 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 AL512504.1-201ENST00000415494 778 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.85□□□□□ -2.11
CXCL1P09341 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC1.85□□□□□ -2.11
CXCL1P09341 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.85□□□□□ -2.11
CXCL1P09341 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 EZH2P1-201ENST00000431167 291 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 AC010881.1-201ENST00000433830 235 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 NDUFB4P6-201ENST00000436819 366 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 UBE2V1P5-201ENST00000440070 405 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC1.85□□□□□ -2.11
CXCL1P09341 PRSS3P4-201ENST00000453323 162 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 RNU6-717P-201ENST00000459076 104 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 AP001992.1-205ENST00000462248 379 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.85□□□□□ -2.11
CXCL1P09341 AC026427.2-201ENST00000506228 536 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.85□□□□□ -2.11
CXCL1P09341 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CXCL1P09341 AC087808.1-201ENST00000520501 361 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 AC025755.1-201ENST00000521306 278 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 HAUS1P3-201ENST00000523909 662 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 AC034105.4-201ENST00000568304 277 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 AL136363.1-201ENST00000605349 337 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.85□□□□□ -2.11
CXCL1P09341 AP004247.3-201ENST00000608682 624 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 AC112503.2-201ENST00000609005 552 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 AC084757.4-201ENST00000616350 526 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 AC006133.1-201ENST00000617106 264 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 STMN1P1-201ENST00000617809 440 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.85□□□□□ -2.11
CXCL1P09341 AC092608.3-201ENST00000625017 386 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.85□□□□□ -2.11
CXCL1P09341 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.85□□□□□ -2.11
CXCL1P09341 AC017104.5-201ENST00000637647 639 ntBASIC1.85□□□□□ -2.11
CXCL1P09341 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CXCL1P09341 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
CXCL1P09341 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.84□□□□□ -2.11
CXCL1P09341 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CXCL1P09341 AL596028.1-201ENST00000326971 197 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 RNU6-543P-201ENST00000362576 108 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 RNA5SP138-201ENST00000365098 114 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 RNA5SP37-201ENST00000365420 130 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CXCL1P09341 MIR34B-201ENST00000385076 84 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.84□□□□□ -2.11
CXCL1P09341 AC092745.2-202ENST00000411880 369 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CXCL1P09341 RPL35AP12-201ENST00000425362 338 ntBASIC1.84□□□□□ -2.11
CXCL1P09341 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms