Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC027104.1-201ENST00000563702 681 ntBASIC2.38□□□□□ -2.03
HLA-DQB2P05538 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DQB2P05538 DUXAP4-201ENST00000603046 613 ntBASIC2.38□□□□□ -2.03
HLA-DQB2P05538 RPL23AP88-201ENST00000605759 454 ntBASIC2.38□□□□□ -2.03
HLA-DQB2P05538 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
HLA-DQB2P05538 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DQB2P05538 AC090617.9-201ENST00000623751 147 ntBASIC2.38□□□□□ -2.03
HLA-DQB2P05538 AC079228.1-201ENST00000624774 1049 ntBASIC2.38□□□□□ -2.03
HLA-DQB2P05538 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DQB2P05538 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
HLA-DQB2P05538 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DQB2P05538 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DQB2P05538 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.37□□□□□ -2.03
HLA-DQB2P05538 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
HLA-DQB2P05538 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DQB2P05538 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
HLA-DQB2P05538 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DQB2P05538 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DQB2P05538 SNORD114-30-201ENST00000364448 72 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 XGY1-201ENST00000381172 446 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 SNORA36C-201ENST00000384289 132 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DQB2P05538 AL139095.1-201ENST00000404326 391 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 RNU6-272P-201ENST00000411028 104 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 RN7SKP140-201ENST00000411196 284 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 HMGB3P31-201ENST00000413333 595 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 AC073310.1-201ENST00000423226 1033 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 MTATP6P4-201ENST00000427725 675 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 AC010881.1-201ENST00000433830 235 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 RPS15AP28-201ENST00000435088 386 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DQB2P05538 UBBP3-201ENST00000445497 241 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 MTND1P33-201ENST00000446251 917 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DQB2P05538 AL445669.2-201ENST00000454425 421 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 AC027673.1-201ENST00000456245 405 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 RPS23P3-201ENST00000470993 430 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 RPS27P23-201ENST00000487608 251 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.37□□□□□ -2.03
HLA-DQB2P05538 XKRY-201ENST00000510392 1100 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 MTCYBP37-201ENST00000510642 1133 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
HLA-DQB2P05538 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DQB2P05538 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DQB2P05538 AC090695.1-201ENST00000561269 1222 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DQB2P05538 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DQB2P05538 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DQB2P05538 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DQB2P05538 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DQB2P05538 AC025281.1-201ENST00000567026 265 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DQB2P05538 AC008962.1-201ENST00000605729 304 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 AC092650.2-201ENST00000619984 902 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 AC006249.1-201ENST00000621223 471 ntBASIC2.37□□□□□ -2.03
HLA-DQB2P05538 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-DQB2P05538 AC097714.1-201ENST00000511272 1647 ntBASIC2.36□□□□□ -2.03
HLA-DQB2P05538 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
HLA-DQB2P05538 SNORA14A-201ENST00000364773 135 ntBASIC2.36□□□□□ -2.03
HLA-DQB2P05538 RNA5SP492-201ENST00000411330 114 ntBASIC2.36□□□□□ -2.03
HLA-DQB2P05538 MTCO3P12-201ENST00000416718 547 ntBASIC2.36□□□□□ -2.03
HLA-DQB2P05538 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.36□□□□□ -2.03
HLA-DQB2P05538 Z96811.1-201ENST00000445880 108 ntBASIC2.36□□□□□ -2.03
HLA-DQB2P05538 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.36□□□□□ -2.03
HLA-DQB2P05538 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.36□□□□□ -2.03
HLA-DQB2P05538 AC022690.1-201ENST00000526681 550 ntBASIC2.36□□□□□ -2.03
HLA-DQB2P05538 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DQB2P05538 COX6CP3-201ENST00000580869 223 ntBASIC2.36□□□□□ -2.03
HLA-DQB2P05538 AL137847.3-201ENST00000611521 109 ntBASIC2.36□□□□□ -2.03
HLA-DQB2P05538 AC025034.2-201ENST00000623264 286 ntBASIC2.36□□□□□ -2.03
HLA-DQB2P05538 AP003400.6-201ENST00000624698 740 ntBASIC2.36□□□□□ -2.03
HLA-DQB2P05538 AL160394.1-201ENST00000624765 724 ntBASIC2.36□□□□□ -2.03
HLA-DQB2P05538 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.36□□□□□ -2.03
HLA-DQB2P05538 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.36□□□□□ -2.03
HLA-DQB2P05538 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.36□□□□□ -2.03
HLA-DQB2P05538 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.36□□□□□ -2.03
HLA-DQB2P05538 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
HLA-DQB2P05538 SNORD56.5-201ENST00000364281 72 ntBASIC2.35□□□□□ -2.03
HLA-DQB2P05538 RNU1-109P-201ENST00000383960 147 ntBASIC2.35□□□□□ -2.03
HLA-DQB2P05538 AL589655.1-201ENST00000405398 482 ntBASIC2.35□□□□□ -2.03
HLA-DQB2P05538 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DQB2P05538 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DQB2P05538 AC018634.1-201ENST00000437554 401 ntBASIC2.35□□□□□ -2.03
HLA-DQB2P05538 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DQB2P05538 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DQB2P05538 RPL21P131-201ENST00000497298 483 ntBASIC2.35□□□□□ -2.03
HLA-DQB2P05538 AC069306.1-201ENST00000507006 843 ntBASIC2.35□□□□□ -2.03
HLA-DQB2P05538 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DQB2P05538 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DQB2P05538 AP003122.3-201ENST00000526316 255 ntBASIC2.35□□□□□ -2.03
HLA-DQB2P05538 OR4R2P-201ENST00000530815 597 ntBASIC2.35□□□□□ -2.03
HLA-DQB2P05538 AC125611.2-201ENST00000551907 647 ntBASIC2.35□□□□□ -2.03
HLA-DQB2P05538 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DQB2P05538 AADACP1-206ENST00000561502 1193 ntBASIC2.35□□□□□ -2.03
HLA-DQB2P05538 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DQB2P05538 TPMTP1-201ENST00000592307 737 ntBASIC2.35□□□□□ -2.03
HLA-DQB2P05538 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DQB2P05538 AC079089.3-201ENST00000603094 673 ntBASIC2.35□□□□□ -2.03
HLA-DQB2P05538 AC128687.1-201ENST00000605304 619 ntBASIC2.35□□□□□ -2.03
HLA-DQB2P05538 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms