Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AC092902.1-201ENST00000486999 259 ntBASIC2.49□□□□□ -2.01
MT-ND4P03905 PRELID3BP6-201ENST00000503839 571 ntBASIC2.49□□□□□ -2.01
MT-ND4P03905 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.49□□□□□ -2.01
MT-ND4P03905 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.49□□□□□ -2.01
MT-ND4P03905 AC087373.1-201ENST00000524920 491 ntBASIC2.49□□□□□ -2.01
MT-ND4P03905 AP003066.2-201ENST00000529375 555 ntBASIC2.49□□□□□ -2.01
MT-ND4P03905 SNRPGP16-201ENST00000533275 226 ntBASIC2.49□□□□□ -2.01
MT-ND4P03905 AL133271.1-201ENST00000538229 291 ntBASIC2.49□□□□□ -2.01
MT-ND4P03905 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.49□□□□□ -2.01
MT-ND4P03905 AC008127.2-201ENST00000549925 1075 ntBASIC2.49□□□□□ -2.01
MT-ND4P03905 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.49□□□□□ -2.01
MT-ND4P03905 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
MT-ND4P03905 AC090666.1-201ENST00000578241 445 ntBASIC2.49□□□□□ -2.01
MT-ND4P03905 MIR4444-1-201ENST00000581696 74 ntBASIC2.49□□□□□ -2.01
MT-ND4P03905 MIR4444-2-201ENST00000584390 74 ntBASIC2.49□□□□□ -2.01
MT-ND4P03905 AC020895.1-201ENST00000595362 272 ntBASIC2.49□□□□□ -2.01
MT-ND4P03905 VN1R87P-201ENST00000596706 487 ntBASIC2.49□□□□□ -2.01
MT-ND4P03905 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.49□□□□□ -2.01
MT-ND4P03905 AP001330.4-201ENST00000604350 154 ntBASIC2.49□□□□□ -2.01
MT-ND4P03905 AC019159.1-201ENST00000605094 187 ntBASIC2.49□□□□□ -2.01
MT-ND4P03905 AC091946.2-201ENST00000606105 291 ntBASIC2.49□□□□□ -2.01
MT-ND4P03905 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.49□□□□□ -2.01
MT-ND4P03905 AC090115.4-201ENST00000609970 188 ntBASIC2.49□□□□□ -2.01
MT-ND4P03905 MIR6076-201ENST00000617521 113 ntBASIC2.49□□□□□ -2.01
MT-ND4P03905 AL353748.2-201ENST00000622148 471 ntBASIC2.49□□□□□ -2.01
MT-ND4P03905 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.49□□□□□ -2.01
MT-ND4P03905 AC002064.3-201ENST00000623448 346 ntBASIC2.49□□□□□ -2.01
MT-ND4P03905 ZNF663P-202ENST00000641770 1131 ntBASIC2.49□□□□□ -2.01
MT-ND4P03905 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
MT-ND4P03905 MTCO1P23-201ENST00000415223 1526 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 AC138915.1-201ENST00000565427 1685 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
MT-ND4P03905 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 AC011460.1-201ENST00000636268 1834 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 HMGB1P5-201ENST00000255320 642 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
MT-ND4P03905 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
MT-ND4P03905 SNORA71.3-201ENST00000362582 128 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 RNU6-492P-201ENST00000363035 104 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 RNU6-1066P-201ENST00000363573 105 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 RNA5SP72-201ENST00000364442 117 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
MT-ND4P03905 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
MT-ND4P03905 RNA5SP252-201ENST00000391131 119 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
MT-ND4P03905 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.48□□□□□ -2.01
MT-ND4P03905 AC099677.1-201ENST00000420575 175 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.48□□□□□ -2.01
MT-ND4P03905 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.48□□□□□ -2.01
MT-ND4P03905 AL162389.1-201ENST00000449233 177 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 PRSS3P4-201ENST00000453323 162 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 AC234775.1-201ENST00000454247 670 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 AP000705.1-201ENST00000454567 350 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 RN7SL807P-201ENST00000470923 297 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 AC013828.1-201ENST00000481845 158 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 RPL30P14-201ENST00000482744 348 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 AC026414.1-201ENST00000504046 698 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.48□□□□□ -2.01
MT-ND4P03905 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.48□□□□□ -2.01
MT-ND4P03905 SNORA31.8-201ENST00000516327 108 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.48□□□□□ -2.01
MT-ND4P03905 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.48□□□□□ -2.01
MT-ND4P03905 AC018630.1-201ENST00000541376 925 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 AC004486.1-201ENST00000546846 233 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.48□□□□□ -2.01
MT-ND4P03905 MIR5004-201ENST00000579078 107 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.48□□□□□ -2.01
MT-ND4P03905 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.48□□□□□ -2.01
MT-ND4P03905 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.48□□□□□ -2.01
MT-ND4P03905 AC055876.5-201ENST00000605667 259 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 AC099785.1-201ENST00000605697 437 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 AL583856.2-201ENST00000606298 543 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 AL355493.4-201ENST00000618530 292 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 AC026422.1-201ENST00000623961 452 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.48□□□□□ -2.01
MT-ND4P03905 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
MT-ND4P03905 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
MT-ND4P03905 SGO1P2-201ENST00000429458 1589 ntBASIC2.48□□□□□ -2.01
MT-ND4P03905 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
MT-ND4P03905 GDI2P1-201ENST00000429312 1336 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 RNVU1-14-201ENST00000384770 164 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 MIR512-1-201ENST00000384913 84 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 RNU2-28P-201ENST00000410457 189 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 RPS3AP25-201ENST00000411660 793 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.47□□□□□ -2.01
MT-ND4P03905 BTF3P8-201ENST00000414577 526 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.47□□□□□ -2.01
MT-ND4P03905 BX682237.1-201ENST00000415016 335 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 AL645937.1-202ENST00000421799 937 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.47□□□□□ -2.01
MT-ND4P03905 AC013262.1-201ENST00000426710 252 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 AC092017.2-201ENST00000427600 362 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 MTND4LP10-201ENST00000435146 291 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 MTCYBP34-201ENST00000439552 670 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.47□□□□□ -2.01
MT-ND4P03905 snoU109.4-201ENST00000458953 143 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 FTH1P2-201ENST00000466086 412 ntBASIC2.47□□□□□ -2.01
MT-ND4P03905 AC117440.1-201ENST00000474107 571 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms