Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.18□□□□□ -1.9
MT-ND1P03886 U1.23-201ENST00000610293 146 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 RNU1-68P-201ENST00000615382 146 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 AL136981.2-201ENST00000617319 734 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 U1.39-201ENST00000621562 146 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 AC068724.3-201ENST00000625906 87 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.18□□□□□ -1.9
MT-ND1P03886 U6.101-201ENST00000637707 76 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 AC103706.2-201ENST00000638080 240 ntBASIC3.18□□□□□ -1.9
MT-ND1P03886 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.18□□□□□ -1.9
MT-ND1P03886 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
MT-ND1P03886 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.18□□□□□ -1.9
MT-ND1P03886 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
MT-ND1P03886 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
MT-ND1P03886 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
MT-ND1P03886 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
MT-ND1P03886 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.17□□□□□ -1.9
MT-ND1P03886 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.17□□□□□ -1.9
MT-ND1P03886 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
MT-ND1P03886 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
MT-ND1P03886 SNORA4.1-201ENST00000364263 144 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 RNU6-1122P-201ENST00000384449 107 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 AL590084.2-201ENST00000401481 382 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 RNU4-72P-201ENST00000410754 173 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 RAB28P1-201ENST00000411517 641 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.17□□□□□ -1.9
MT-ND1P03886 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.17□□□□□ -1.9
MT-ND1P03886 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.17□□□□□ -1.9
MT-ND1P03886 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.17□□□□□ -1.9
MT-ND1P03886 NIPA2P1-201ENST00000426223 976 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.17□□□□□ -1.9
MT-ND1P03886 SNRPEP4-201ENST00000435815 279 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 RPL23AP22-201ENST00000437556 453 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 AL445567.1-201ENST00000439121 144 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.17□□□□□ -1.9
MT-ND1P03886 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.17□□□□□ -1.9
MT-ND1P03886 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.17□□□□□ -1.9
MT-ND1P03886 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.17□□□□□ -1.9
MT-ND1P03886 AC008264.1-201ENST00000447612 367 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 RPL26P28-201ENST00000451325 435 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 RNU7-125P-201ENST00000458760 62 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 SNORD105B-201ENST00000458770 79 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 AP002884.2-201ENST00000471647 395 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.17□□□□□ -1.9
MT-ND1P03886 TMEM251P1-201ENST00000503717 318 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 XKRY-201ENST00000510392 1100 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 AC006499.2-201ENST00000513470 337 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 RN7SKP21-201ENST00000516503 220 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 AC068657.1-201ENST00000520807 306 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 DEFB131D-201ENST00000526803 184 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.17□□□□□ -1.9
MT-ND1P03886 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
MT-ND1P03886 UBE2NP1-201ENST00000545592 458 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.17□□□□□ -1.9
MT-ND1P03886 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.17□□□□□ -1.9
MT-ND1P03886 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.17□□□□□ -1.9
MT-ND1P03886 AC135628.1-201ENST00000568867 534 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 MIR3160-1-201ENST00000577972 85 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 BNIP3P24-201ENST00000593398 557 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 AC006539.2-201ENST00000601729 572 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.17□□□□□ -1.9
MT-ND1P03886 AC068831.7-201ENST00000616954 363 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.17□□□□□ -1.9
MT-ND1P03886 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.17□□□□□ -1.9
MT-ND1P03886 AC005183.1-201ENST00000603687 1979 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.17□□□□□ -1.9
MT-ND1P03886 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
MT-ND1P03886 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.17□□□□□ -1.9
MT-ND1P03886 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
MT-ND1P03886 OR5BR1P-201ENST00000524992 1330 ntBASIC3.17□□□□□ -1.9
MT-ND1P03886 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
MT-ND1P03886 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
MT-ND1P03886 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.16□□□□□ -1.9
MT-ND1P03886 AL390862.1-201ENST00000635467 1469 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 ZNF807-201ENST00000328088 1707 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MT-ND1P03886 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MT-ND1P03886 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MT-ND1P03886 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
MT-ND1P03886 RNU6-173P-201ENST00000364215 104 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MT-ND1P03886 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.16□□□□□ -1.9
MT-ND1P03886 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.16□□□□□ -1.9
MT-ND1P03886 AL356131.1-201ENST00000405826 414 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 SNORA11B-201ENST00000408175 129 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 MTCYBP38-201ENST00000417160 1123 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 MTND2P18-201ENST00000419962 1030 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 AL035423.1-201ENST00000420331 213 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.16□□□□□ -1.9
MT-ND1P03886 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.16□□□□□ -1.9
MT-ND1P03886 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
MT-ND1P03886 TXNL1P1-201ENST00000429528 554 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 HIGD1AP11-201ENST00000438361 280 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.16□□□□□ -1.9
MT-ND1P03886 ARPC3P2-201ENST00000457786 533 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 RPS15AP17-201ENST00000470598 390 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
MT-ND1P03886 AC103987.1-201ENST00000473394 348 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 AC093281.2-201ENST00000510153 597 ntBASIC3.16□□□□□ -1.9
MT-ND1P03886 LTV1P1-201ENST00000510683 1237 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms