Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.09□□□□□ -2.07
TNFP01375 HMGN2P30-201ENST00000423237 256 ntBASIC2.09□□□□□ -2.07
TNFP01375 PTP4A1P7-201ENST00000423476 514 ntBASIC2.09□□□□□ -2.07
TNFP01375 TOMM20P4-201ENST00000427861 435 ntBASIC2.09□□□□□ -2.07
TNFP01375 ELOCP13-201ENST00000443934 329 ntBASIC2.09□□□□□ -2.07
TNFP01375 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.09□□□□□ -2.07
TNFP01375 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.09□□□□□ -2.07
TNFP01375 MTND2P8-201ENST00000450555 1025 ntBASIC2.09□□□□□ -2.07
TNFP01375 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.09□□□□□ -2.07
TNFP01375 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.09□□□□□ -2.07
TNFP01375 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.09□□□□□ -2.07
TNFP01375 NAMPTP2-201ENST00000505629 1115 ntBASIC2.09□□□□□ -2.07
TNFP01375 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.09□□□□□ -2.07
TNFP01375 AL442163.2-201ENST00000553912 710 ntBASIC2.09□□□□□ -2.07
TNFP01375 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.09□□□□□ -2.07
TNFP01375 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.09□□□□□ -2.07
TNFP01375 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC2.09□□□□□ -2.07
TNFP01375 PCNAP1-202ENST00000595299 752 ntBASIC2.09□□□□□ -2.07
TNFP01375 NTAN1P1-201ENST00000603150 646 ntBASIC2.09□□□□□ -2.07
TNFP01375 AC098826.3-201ENST00000603823 466 ntBASIC2.09□□□□□ -2.07
TNFP01375 AC106791.2-201ENST00000604680 391 ntBASIC2.09□□□□□ -2.07
TNFP01375 AL392112.1-201ENST00000605115 829 ntBASIC2.09□□□□□ -2.07
TNFP01375 AC245517.5-201ENST00000611529 162 ntBASIC2.09□□□□□ -2.07
TNFP01375 AL110115.1-201ENST00000614396 364 ntBASIC2.09□□□□□ -2.07
TNFP01375 AC008083.4-201ENST00000615076 444 ntBASIC2.09□□□□□ -2.07
TNFP01375 AL162233.1-201ENST00000620014 944 ntBASIC2.09□□□□□ -2.07
TNFP01375 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.09□□□□□ -2.07
TNFP01375 AC093591.3-201ENST00000634516 308 ntBASIC2.09□□□□□ -2.07
TNFP01375 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.08
TNFP01375 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
TNFP01375 AC026241.1-201ENST00000517873 2142 ntBASIC2.08□□□□□ -2.08
TNFP01375 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
TNFP01375 FRG1BP-201ENST00000278882 761 ntBASIC2.08□□□□□ -2.08
TNFP01375 HNRNPDP2-201ENST00000406475 478 ntBASIC2.08□□□□□ -2.08
TNFP01375 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.08□□□□□ -2.08
TNFP01375 RPS15AP40-201ENST00000419621 391 ntBASIC2.08□□□□□ -2.08
TNFP01375 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.08□□□□□ -2.08
TNFP01375 HMGN2P3-201ENST00000433603 273 ntBASIC2.08□□□□□ -2.08
TNFP01375 HMGN2P5-201ENST00000436882 273 ntBASIC2.08□□□□□ -2.08
TNFP01375 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.08□□□□□ -2.08
TNFP01375 AC010301.1-201ENST00000473936 355 ntBASIC2.08□□□□□ -2.08
TNFP01375 GAPDHP39-201ENST00000481866 979 ntBASIC2.08□□□□□ -2.08
TNFP01375 MTND3P6-201ENST00000485242 339 ntBASIC2.08□□□□□ -2.08
TNFP01375 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.08□□□□□ -2.08
TNFP01375 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.08□□□□□ -2.08
TNFP01375 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.08□□□□□ -2.08
TNFP01375 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.08□□□□□ -2.08
TNFP01375 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.08□□□□□ -2.08
TNFP01375 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.08□□□□□ -2.08
TNFP01375 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.08□□□□□ -2.08
TNFP01375 SNORA31.11-201ENST00000516528 139 ntBASIC2.08□□□□□ -2.08
TNFP01375 AP004371.1-201ENST00000525240 214 ntBASIC2.08□□□□□ -2.08
TNFP01375 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.08□□□□□ -2.08
TNFP01375 AP000867.2-201ENST00000532468 320 ntBASIC2.08□□□□□ -2.08
TNFP01375 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.08□□□□□ -2.08
TNFP01375 AP003717.3-201ENST00000544832 1180 ntBASIC2.08□□□□□ -2.08
TNFP01375 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.08□□□□□ -2.08
TNFP01375 AC135628.1-201ENST00000568867 534 ntBASIC2.08□□□□□ -2.08
TNFP01375 AC007336.1-201ENST00000576365 3828 ntBASIC2.08□□□□□ -2.08
TNFP01375 AC009220.3-201ENST00000604318 586 ntBASIC2.08□□□□□ -2.08
TNFP01375 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.08□□□□□ -2.08
TNFP01375 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.08□□□□□ -2.08
TNFP01375 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TNFP01375 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TNFP01375 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.08□□□□□ -2.08
TNFP01375 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
TNFP01375 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TNFP01375 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.07□□□□□ -2.08
TNFP01375 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TNFP01375 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
TNFP01375 RNU6-666P-201ENST00000363499 107 ntBASIC2.07□□□□□ -2.08
TNFP01375 AC092447.6-201ENST00000414578 210 ntBASIC2.07□□□□□ -2.08
TNFP01375 AC010881.1-201ENST00000433830 235 ntBASIC2.07□□□□□ -2.08
TNFP01375 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TNFP01375 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.07□□□□□ -2.08
TNFP01375 AC004866.2-201ENST00000438285 481 ntBASIC2.07□□□□□ -2.08
TNFP01375 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.07□□□□□ -2.08
TNFP01375 AL035407.2-201ENST00000454090 378 ntBASIC2.07□□□□□ -2.08
TNFP01375 AC068587.2-201ENST00000478386 781 ntBASIC2.07□□□□□ -2.08
TNFP01375 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.07□□□□□ -2.08
TNFP01375 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.07□□□□□ -2.08
TNFP01375 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.07□□□□□ -2.08
TNFP01375 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TNFP01375 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC2.07□□□□□ -2.08
TNFP01375 AC087241.2-201ENST00000535801 324 ntBASIC2.07□□□□□ -2.08
TNFP01375 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.07□□□□□ -2.08
TNFP01375 AC008083.2-201ENST00000546707 476 ntBASIC2.07□□□□□ -2.08
TNFP01375 MIR4446-201ENST00000578505 67 ntBASIC2.07□□□□□ -2.08
TNFP01375 AC104763.2-201ENST00000604179 382 ntBASIC2.07□□□□□ -2.08
TNFP01375 AC024560.3-201ENST00000608482 349 ntBASIC2.07□□□□□ -2.08
TNFP01375 VN1R9P-201ENST00000614184 867 ntBASIC2.07□□□□□ -2.08
TNFP01375 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.07□□□□□ -2.08
TNFP01375 AC026634.1-201ENST00000634369 198 ntBASIC2.07□□□□□ -2.08
TNFP01375 AC093536.2-201ENST00000565257 1406 ntBASIC2.07□□□□□ -2.08
TNFP01375 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
TNFP01375 MTND5P29-201ENST00000458676 1807 ntBASIC2.06□□□□□ -2.08
TNFP01375 RNA5SP88-201ENST00000365560 109 ntBASIC2.06□□□□□ -2.08
TNFP01375 GSTA9P-201ENST00000406231 611 ntBASIC2.06□□□□□ -2.08
TNFP01375 AL445646.1-201ENST00000431784 216 ntBASIC2.06□□□□□ -2.08
TNFP01375 AL118520.1-201ENST00000450770 291 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms