Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AC068790.3-201ENST00000602988 553 ntBASIC2.82□□□□□ -1.96
POLR1AO95602 AC092954.1-201ENST00000609121 445 ntBASIC2.82□□□□□ -1.96
POLR1AO95602 AC012531.5-201ENST00000611375 151 ntBASIC2.82□□□□□ -1.96
POLR1AO95602 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
POLR1AO95602 MTND4P1-201ENST00000457501 1466 ntBASIC2.82□□□□□ -1.96
POLR1AO95602 AP001148.1-201ENST00000624124 2359 ntBASIC2.82□□□□□ -1.96
POLR1AO95602 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
POLR1AO95602 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.82□□□□□ -1.96
POLR1AO95602 XIST-201ENST00000416330 750 ntTSL 2 BASIC2.82□□□□□ -1.96
POLR1AO95602 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.82□□□□□ -1.96
POLR1AO95602 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.82□□□□□ -1.96
POLR1AO95602 AC002984.1-201ENST00000591692 448 ntBASIC2.82□□□□□ -1.96
POLR1AO95602 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.82□□□□□ -1.96
POLR1AO95602 AC093909.5-201ENST00000621839 1799 ntBASIC2.81□□□□□ -1.96
POLR1AO95602 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.81□□□□□ -1.96
POLR1AO95602 RNA5SP160-201ENST00000364866 120 ntBASIC2.81□□□□□ -1.96
POLR1AO95602 RNU6-178P-201ENST00000384631 104 ntBASIC2.81□□□□□ -1.96
POLR1AO95602 AC092638.1-201ENST00000411966 1275 ntBASIC2.81□□□□□ -1.96
POLR1AO95602 RPS7P5-201ENST00000441482 581 ntBASIC2.81□□□□□ -1.96
POLR1AO95602 AC005912.1-201ENST00000495392 255 ntBASIC2.81□□□□□ -1.96
POLR1AO95602 AP001542.2-201ENST00000593141 364 ntBASIC2.81□□□□□ -1.96
POLR1AO95602 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.81□□□□□ -1.96
POLR1AO95602 AC009314.1-201ENST00000603871 304 ntBASIC2.81□□□□□ -1.96
POLR1AO95602 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.81□□□□□ -1.96
POLR1AO95602 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
POLR1AO95602 MIR1276-201ENST00000408707 83 ntBASIC2.8□□□□□ -1.96
POLR1AO95602 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.8□□□□□ -1.96
POLR1AO95602 HMGB1P31-201ENST00000437242 427 ntBASIC2.8□□□□□ -1.96
POLR1AO95602 AC025033.1-201ENST00000463883 194 ntBASIC2.8□□□□□ -1.96
POLR1AO95602 AC090515.1-201ENST00000465295 476 ntBASIC2.8□□□□□ -1.96
POLR1AO95602 AC079804.2-201ENST00000490376 200 ntBASIC2.8□□□□□ -1.96
POLR1AO95602 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.8□□□□□ -1.96
POLR1AO95602 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.8□□□□□ -1.96
POLR1AO95602 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.8□□□□□ -1.96
POLR1AO95602 AC106730.3-201ENST00000624568 641 ntBASIC2.8□□□□□ -1.96
POLR1AO95602 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.8□□□□□ -1.96
POLR1AO95602 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.8□□□□□ -1.96
POLR1AO95602 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
POLR1AO95602 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
POLR1AO95602 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
POLR1AO95602 Y_RNA.224-201ENST00000364308 111 ntBASIC2.79□□□□□ -1.96
POLR1AO95602 AC023128.2-201ENST00000420880 1223 ntBASIC2.79□□□□□ -1.96
POLR1AO95602 HIGD1AP11-201ENST00000438361 280 ntBASIC2.79□□□□□ -1.96
POLR1AO95602 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.79□□□□□ -1.96
POLR1AO95602 RPP40P2-201ENST00000603596 712 ntBASIC2.79□□□□□ -1.96
POLR1AO95602 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
POLR1AO95602 AL358453.1-201ENST00000422522 250 ntBASIC2.79□□□□□ -1.96
POLR1AO95602 RNU7-95P-201ENST00000459222 64 ntBASIC2.79□□□□□ -1.96
POLR1AO95602 RNA5SP309-201ENST00000516670 106 ntBASIC2.79□□□□□ -1.96
POLR1AO95602 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.79□□□□□ -1.96
POLR1AO95602 OR4P1P-201ENST00000530808 1136 ntBASIC2.79□□□□□ -1.96
POLR1AO95602 AC020895.1-201ENST00000595362 272 ntBASIC2.79□□□□□ -1.96
POLR1AO95602 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.78□□□□□ -1.96
POLR1AO95602 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
POLR1AO95602 RPS15AP12-201ENST00000419498 388 ntBASIC2.78□□□□□ -1.96
POLR1AO95602 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.78□□□□□ -1.96
POLR1AO95602 RPS26P21-201ENST00000475397 348 ntBASIC2.78□□□□□ -1.96
POLR1AO95602 AC023424.2-201ENST00000493479 777 ntBASIC2.78□□□□□ -1.96
POLR1AO95602 AP005136.1-201ENST00000579765 429 ntBASIC2.78□□□□□ -1.96
POLR1AO95602 AP001486.2-201ENST00000561652 5113 ntBASIC2.78□□□□□ -1.96
POLR1AO95602 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.77□□□□□ -1.97
POLR1AO95602 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
POLR1AO95602 RNY1P14-201ENST00000384426 108 ntBASIC2.77□□□□□ -1.97
POLR1AO95602 RNU2-68P-201ENST00000410878 191 ntBASIC2.77□□□□□ -1.97
POLR1AO95602 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.77□□□□□ -1.97
POLR1AO95602 MTCO3P21-201ENST00000430791 643 ntBASIC2.77□□□□□ -1.97
POLR1AO95602 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.77□□□□□ -1.97
POLR1AO95602 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.77□□□□□ -1.97
POLR1AO95602 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.77□□□□□ -1.97
POLR1AO95602 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.77□□□□□ -1.97
POLR1AO95602 AC007182.2-201ENST00000489251 402 ntBASIC2.77□□□□□ -1.97
POLR1AO95602 RNA5SP182-201ENST00000516064 82 ntBASIC2.77□□□□□ -1.97
POLR1AO95602 RPS3AP23-202ENST00000574601 686 ntBASIC2.77□□□□□ -1.97
POLR1AO95602 SEPT7P7-201ENST00000420492 1301 ntBASIC2.77□□□□□ -1.97
POLR1AO95602 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.76□□□□□ -1.97
POLR1AO95602 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.76□□□□□ -1.97
POLR1AO95602 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.76□□□□□ -1.97
POLR1AO95602 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.76□□□□□ -1.97
POLR1AO95602 SNORA25.15-201ENST00000516487 89 ntBASIC2.76□□□□□ -1.97
POLR1AO95602 ARL2BPP2-201ENST00000550907 489 ntBASIC2.76□□□□□ -1.97
POLR1AO95602 Y_RNA.783-201ENST00000613546 102 ntBASIC2.76□□□□□ -1.97
POLR1AO95602 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.76□□□□□ -1.97
POLR1AO95602 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.76□□□□□ -1.97
POLR1AO95602 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.76□□□□□ -1.97
POLR1AO95602 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.76□□□□□ -1.97
POLR1AO95602 SNRPFP4-201ENST00000456366 242 ntBASIC2.76□□□□□ -1.97
POLR1AO95602 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.76□□□□□ -1.97
POLR1AO95602 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.76□□□□□ -1.97
POLR1AO95602 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
POLR1AO95602 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.76□□□□□ -1.97
POLR1AO95602 AL121917.1-203ENST00000605534 577 ntBASIC2.76□□□□□ -1.97
POLR1AO95602 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
POLR1AO95602 AL513331.1-201ENST00000411908 397 ntBASIC2.75□□□□□ -1.97
POLR1AO95602 RPL23AP39-201ENST00000415533 405 ntBASIC2.75□□□□□ -1.97
POLR1AO95602 AC009237.8-201ENST00000445492 379 ntBASIC2.75□□□□□ -1.97
POLR1AO95602 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.75□□□□□ -1.97
POLR1AO95602 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
POLR1AO95602 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.75□□□□□ -1.97
POLR1AO95602 KATNBL1P1-201ENST00000605192 748 ntBASIC2.75□□□□□ -1.97
POLR1AO95602 AC010678.1-201ENST00000614118 713 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms