Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RNU6-8-201ENST00000365467 107 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.85□□□□□ -1.95
CTDNEP1O95476 AL121972.1-201ENST00000402023 252 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 MTND4P13-201ENST00000402078 1023 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.85□□□□□ -1.95
CTDNEP1O95476 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.85□□□□□ -1.95
CTDNEP1O95476 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.85□□□□□ -1.95
CTDNEP1O95476 AC012497.1-201ENST00000429392 575 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.85□□□□□ -1.95
CTDNEP1O95476 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.85□□□□□ -1.95
CTDNEP1O95476 RAB11AP1-201ENST00000442978 646 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 AL050341.1-201ENST00000447743 313 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 Z99714.1-201ENST00000450463 807 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 AP001486.1-201ENST00000463339 476 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.85□□□□□ -1.95
CTDNEP1O95476 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.85□□□□□ -1.95
CTDNEP1O95476 RPS27P23-201ENST00000487608 251 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.85□□□□□ -1.95
CTDNEP1O95476 AC069306.1-201ENST00000507006 843 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CTDNEP1O95476 RNA5SP148-201ENST00000516527 94 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 SNORA31.26-201ENST00000517250 137 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.85□□□□□ -1.95
CTDNEP1O95476 UBTFL10-201ENST00000528532 562 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.85□□□□□ -1.95
CTDNEP1O95476 AC012182.1-201ENST00000570133 895 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 MTCO1P40-201ENST00000574371 625 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 AL390838.2-201ENST00000602394 274 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 AL590282.1-201ENST00000610379 1136 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 AL512427.1-201ENST00000618593 349 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 AC018926.3-201ENST00000618841 406 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 AC092608.2-201ENST00000624427 218 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 MTND4P8-201ENST00000514997 1362 ntBASIC2.85□□□□□ -1.95
CTDNEP1O95476 MAPK10-322ENST00000641485 4530 ntBASIC2.84□□□□□ -1.95
CTDNEP1O95476 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CTDNEP1O95476 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
CTDNEP1O95476 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CTDNEP1O95476 RNU6-1243P-201ENST00000364028 107 ntBASIC2.84□□□□□ -1.95
CTDNEP1O95476 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
CTDNEP1O95476 RNU6-1257P-201ENST00000384625 110 ntBASIC2.84□□□□□ -1.95
CTDNEP1O95476 AL603865.2-201ENST00000401679 213 ntBASIC2.84□□□□□ -1.95
CTDNEP1O95476 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.84□□□□□ -1.95
CTDNEP1O95476 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.84□□□□□ -1.95
CTDNEP1O95476 AC098826.1-201ENST00000433943 471 ntBASIC2.84□□□□□ -1.95
CTDNEP1O95476 AL590639.1-201ENST00000456484 337 ntBASIC2.84□□□□□ -1.95
CTDNEP1O95476 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.84□□□□□ -1.95
CTDNEP1O95476 RPL36AP51-201ENST00000487216 318 ntBASIC2.84□□□□□ -1.95
CTDNEP1O95476 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.84□□□□□ -1.95
CTDNEP1O95476 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.84□□□□□ -1.95
CTDNEP1O95476 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.84□□□□□ -1.95
CTDNEP1O95476 AC104108.1-201ENST00000509930 412 ntBASIC2.84□□□□□ -1.95
CTDNEP1O95476 RNU6-826P-201ENST00000516827 104 ntBASIC2.84□□□□□ -1.95
CTDNEP1O95476 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.84□□□□□ -1.95
CTDNEP1O95476 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.84□□□□□ -1.95
CTDNEP1O95476 IGJP1-201ENST00000522682 475 ntBASIC2.84□□□□□ -1.95
CTDNEP1O95476 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.84□□□□□ -1.95
CTDNEP1O95476 AC019227.1-201ENST00000526902 510 ntBASIC2.84□□□□□ -1.95
CTDNEP1O95476 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.84□□□□□ -1.95
CTDNEP1O95476 AC006518.2-201ENST00000542513 940 ntBASIC2.84□□□□□ -1.95
CTDNEP1O95476 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
CTDNEP1O95476 AC090312.2-201ENST00000582687 378 ntBASIC2.84□□□□□ -1.95
CTDNEP1O95476 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.84□□□□□ -1.95
CTDNEP1O95476 AL020997.3-201ENST00000602843 359 ntBASIC2.84□□□□□ -1.95
CTDNEP1O95476 AP002906.1-201ENST00000603405 233 ntBASIC2.84□□□□□ -1.95
CTDNEP1O95476 AC099785.1-201ENST00000605697 437 ntBASIC2.84□□□□□ -1.95
CTDNEP1O95476 MIR6817-201ENST00000615588 66 ntBASIC2.84□□□□□ -1.95
CTDNEP1O95476 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.84□□□□□ -1.95
CTDNEP1O95476 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
CTDNEP1O95476 AL049777.1-201ENST00000622740 518 ntBASIC2.84□□□□□ -1.95
CTDNEP1O95476 AC126544.2-201ENST00000625174 749 ntBASIC2.84□□□□□ -1.95
CTDNEP1O95476 CYP3A51P-201ENST00000633513 256 ntBASIC2.84□□□□□ -1.95
CTDNEP1O95476 AL356118.1-201ENST00000635272 1078 ntBASIC2.84□□□□□ -1.95
CTDNEP1O95476 AC017104.5-201ENST00000637647 639 ntBASIC2.84□□□□□ -1.95
CTDNEP1O95476 AC006927.2-201ENST00000639256 389 ntBASIC2.84□□□□□ -1.95
CTDNEP1O95476 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CTDNEP1O95476 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.83□□□□□ -1.96
CTDNEP1O95476 AC010733.2-201ENST00000589496 5702 ntBASIC2.83□□□□□ -1.96
CTDNEP1O95476 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.83□□□□□ -1.96
CTDNEP1O95476 AC016716.1-201ENST00000265882 708 ntBASIC2.83□□□□□ -1.96
CTDNEP1O95476 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
CTDNEP1O95476 U3.12-201ENST00000364498 214 ntBASIC2.83□□□□□ -1.96
CTDNEP1O95476 DEFB109C-201ENST00000382575 264 ntBASIC2.83□□□□□ -1.96
CTDNEP1O95476 DEFB109B-201ENST00000382656 264 ntBASIC2.83□□□□□ -1.96
CTDNEP1O95476 RNU6-77P-201ENST00000410554 91 ntBASIC2.83□□□□□ -1.96
CTDNEP1O95476 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.83□□□□□ -1.96
CTDNEP1O95476 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.83□□□□□ -1.96
CTDNEP1O95476 TAF13P2-201ENST00000416876 286 ntBASIC2.83□□□□□ -1.96
CTDNEP1O95476 PAICSP7-201ENST00000419829 962 ntBASIC2.83□□□□□ -1.96
CTDNEP1O95476 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.83□□□□□ -1.96
CTDNEP1O95476 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.83□□□□□ -1.96
CTDNEP1O95476 SDR42E1P3-201ENST00000438345 502 ntBASIC2.83□□□□□ -1.96
CTDNEP1O95476 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.83□□□□□ -1.96
CTDNEP1O95476 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.83□□□□□ -1.96
CTDNEP1O95476 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.83□□□□□ -1.96
CTDNEP1O95476 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CTDNEP1O95476 AL049873.1-201ENST00000480540 376 ntBASIC2.83□□□□□ -1.96
CTDNEP1O95476 AL024509.2-201ENST00000493462 493 ntBASIC2.83□□□□□ -1.96
CTDNEP1O95476 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms