Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC138761.3-201ENST00000579993 334 ntBASIC2.72□□□□□ -1.97
SEMA3DO95025 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.72□□□□□ -1.97
SEMA3DO95025 AC006504.3-201ENST00000586818 523 ntBASIC2.72□□□□□ -1.97
SEMA3DO95025 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.72□□□□□ -1.97
SEMA3DO95025 AC073968.1-201ENST00000618594 637 ntBASIC2.72□□□□□ -1.97
SEMA3DO95025 AC068880.4-201ENST00000623082 495 ntBASIC2.72□□□□□ -1.97
SEMA3DO95025 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.72□□□□□ -1.97
SEMA3DO95025 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.72□□□□□ -1.97
SEMA3DO95025 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.72□□□□□ -1.97
SEMA3DO95025 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.71□□□□□ -1.98
SEMA3DO95025 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.71□□□□□ -1.98
SEMA3DO95025 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SEMA3DO95025 RPL9P7-201ENST00000330965 580 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 MIR26A1-201ENST00000362205 77 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
SEMA3DO95025 RNU6-730P-201ENST00000383954 104 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 RNU6-549P-201ENST00000384433 107 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 AL121978.1-201ENST00000402778 359 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SEMA3DO95025 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.71□□□□□ -1.98
SEMA3DO95025 DUTP6-201ENST00000425573 462 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.71□□□□□ -1.98
SEMA3DO95025 AC005345.1-201ENST00000431868 217 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.71□□□□□ -1.98
SEMA3DO95025 AL513043.1-201ENST00000439124 535 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 AC112653.1-201ENST00000443851 386 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 SEPT14P24-201ENST00000447236 180 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.71□□□□□ -1.98
SEMA3DO95025 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.71□□□□□ -1.98
SEMA3DO95025 AC084024.2-201ENST00000503480 791 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.71□□□□□ -1.98
SEMA3DO95025 NAMPTP2-201ENST00000505629 1115 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.71□□□□□ -1.98
SEMA3DO95025 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.71□□□□□ -1.98
SEMA3DO95025 RNU5A-7P-201ENST00000515979 116 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 SNORA9.3-201ENST00000516383 129 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.71□□□□□ -1.98
SEMA3DO95025 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.71□□□□□ -1.98
SEMA3DO95025 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.71□□□□□ -1.98
SEMA3DO95025 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SEMA3DO95025 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.71□□□□□ -1.98
SEMA3DO95025 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.71□□□□□ -1.98
SEMA3DO95025 AC087481.2-201ENST00000565492 330 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 MIR3605-201ENST00000583214 100 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.71□□□□□ -1.98
SEMA3DO95025 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.71□□□□□ -1.98
SEMA3DO95025 AC024153.1-201ENST00000603103 365 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.71□□□□□ -1.98
SEMA3DO95025 RPAP2P1-201ENST00000603626 1168 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 NUTF2P8-201ENST00000604593 363 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 AC084824.5-201ENST00000612009 413 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 AL138880.2-201ENST00000616214 239 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 AL355493.4-201ENST00000618530 292 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 VN1R7P-201ENST00000619242 903 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
SEMA3DO95025 MTND2P41-201ENST00000637599 773 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
SEMA3DO95025 CUL1P1-201ENST00000509510 2425 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 AC111188.2-201ENST00000529697 1387 ntBASIC2.71□□□□□ -1.98
SEMA3DO95025 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SEMA3DO95025 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SEMA3DO95025 AC090740.1-201ENST00000623193 2262 ntBASIC2.7□□□□□ -1.98
SEMA3DO95025 RNU6-1249P-201ENST00000363237 111 ntBASIC2.7□□□□□ -1.98
SEMA3DO95025 ARF4P3-201ENST00000397387 509 ntBASIC2.7□□□□□ -1.98
SEMA3DO95025 AL023807.1-201ENST00000407932 359 ntBASIC2.7□□□□□ -1.98
SEMA3DO95025 AL136133.1-201ENST00000413694 376 ntBASIC2.7□□□□□ -1.98
SEMA3DO95025 RPL35AP12-201ENST00000425362 338 ntBASIC2.7□□□□□ -1.98
SEMA3DO95025 AC006548.1-201ENST00000427470 102 ntBASIC2.7□□□□□ -1.98
SEMA3DO95025 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.7□□□□□ -1.98
SEMA3DO95025 MTCYBP34-201ENST00000439552 670 ntBASIC2.7□□□□□ -1.98
SEMA3DO95025 AL034418.1-201ENST00000448675 860 ntBASIC2.7□□□□□ -1.98
SEMA3DO95025 PABPC1P3-201ENST00000469174 459 ntBASIC2.7□□□□□ -1.98
SEMA3DO95025 DYNLL1P6-201ENST00000503440 264 ntBASIC2.7□□□□□ -1.98
SEMA3DO95025 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.7□□□□□ -1.98
SEMA3DO95025 RNA5SP135-201ENST00000517019 125 ntBASIC2.7□□□□□ -1.98
SEMA3DO95025 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.7□□□□□ -1.98
SEMA3DO95025 AP000857.1-201ENST00000532151 543 ntBASIC2.7□□□□□ -1.98
SEMA3DO95025 CYB5AP5-201ENST00000549779 389 ntBASIC2.7□□□□□ -1.98
SEMA3DO95025 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SEMA3DO95025 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.7□□□□□ -1.98
SEMA3DO95025 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.7□□□□□ -1.98
SEMA3DO95025 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.7□□□□□ -1.98
SEMA3DO95025 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SEMA3DO95025 RPL21P136-201ENST00000605378 396 ntBASIC2.7□□□□□ -1.98
SEMA3DO95025 AC093732.2-201ENST00000607950 274 ntBASIC2.7□□□□□ -1.98
SEMA3DO95025 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.7□□□□□ -1.98
SEMA3DO95025 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.7□□□□□ -1.98
SEMA3DO95025 AL162274.2-201ENST00000614406 332 ntBASIC2.7□□□□□ -1.98
SEMA3DO95025 CR381572.1-201ENST00000625098 102 ntBASIC2.7□□□□□ -1.98
SEMA3DO95025 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.7□□□□□ -1.98
SEMA3DO95025 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SEMA3DO95025 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
SEMA3DO95025 AC026241.1-201ENST00000517873 2142 ntBASIC2.69□□□□□ -1.98
SEMA3DO95025 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
SEMA3DO95025 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
SEMA3DO95025 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
SEMA3DO95025 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
SEMA3DO95025 SNORA63.3-201ENST00000362682 132 ntBASIC2.69□□□□□ -1.98
SEMA3DO95025 RNU6-1180P-201ENST00000364935 107 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms