Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 MIR613-201ENST00000385248 95 ntBASIC3.29□□□□□ -1.88
PCF11O94913 SNORA48.3-201ENST00000391081 134 ntBASIC3.29□□□□□ -1.88
PCF11O94913 HSPE1P26-201ENST00000405341 275 ntBASIC3.29□□□□□ -1.88
PCF11O94913 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.29□□□□□ -1.88
PCF11O94913 AC007390.1-201ENST00000415722 356 ntBASIC3.29□□□□□ -1.88
PCF11O94913 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.29□□□□□ -1.88
PCF11O94913 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCF11O94913 SNORD13-201ENST00000459299 104 ntBASIC3.29□□□□□ -1.88
PCF11O94913 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.29□□□□□ -1.88
PCF11O94913 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.29□□□□□ -1.88
PCF11O94913 RNA5SP108-201ENST00000605921 117 ntBASIC3.29□□□□□ -1.88
PCF11O94913 AC012213.4-201ENST00000606457 354 ntBASIC3.29□□□□□ -1.88
PCF11O94913 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.29□□□□□ -1.88
PCF11O94913 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCF11O94913 AP001148.1-201ENST00000624124 2359 ntBASIC3.28□□□□□ -1.88
PCF11O94913 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.28□□□□□ -1.88
PCF11O94913 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCF11O94913 MTND4P35-201ENST00000604257 1375 ntBASIC3.28□□□□□ -1.88
PCF11O94913 MIR583-201ENST00000384846 75 ntBASIC3.28□□□□□ -1.88
PCF11O94913 MIR1276-201ENST00000408707 83 ntBASIC3.28□□□□□ -1.88
PCF11O94913 AP000275.1-201ENST00000411943 390 ntBASIC3.28□□□□□ -1.88
PCF11O94913 AP1B1P2-201ENST00000416196 106 ntBASIC3.28□□□□□ -1.88
PCF11O94913 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.28□□□□□ -1.88
PCF11O94913 MTCYBP29-201ENST00000436327 1006 ntBASIC3.28□□□□□ -1.88
PCF11O94913 AC092473.1-201ENST00000441098 221 ntBASIC3.28□□□□□ -1.88
PCF11O94913 RNU7-27P-201ENST00000459281 62 ntBASIC3.28□□□□□ -1.88
PCF11O94913 AC092451.1-201ENST00000480211 153 ntBASIC3.28□□□□□ -1.88
PCF11O94913 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.28□□□□□ -1.88
PCF11O94913 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.28□□□□□ -1.88
PCF11O94913 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.28□□□□□ -1.88
PCF11O94913 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCF11O94913 AP000790.1-201ENST00000528891 737 ntBASIC3.28□□□□□ -1.88
PCF11O94913 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.28□□□□□ -1.88
PCF11O94913 AP001180.3-201ENST00000582221 145 ntBASIC3.28□□□□□ -1.88
PCF11O94913 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.28□□□□□ -1.88
PCF11O94913 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.28□□□□□ -1.88
PCF11O94913 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
PCF11O94913 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCF11O94913 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
PCF11O94913 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
PCF11O94913 AC000367.1-201ENST00000452711 1766 ntBASIC3.27□□□□□ -1.89
PCF11O94913 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.27□□□□□ -1.89
PCF11O94913 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.27□□□□□ -1.89
PCF11O94913 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.27□□□□□ -1.89
PCF11O94913 RPL23AP76-201ENST00000441860 458 ntBASIC3.27□□□□□ -1.89
PCF11O94913 MIR3670-2-201ENST00000582974 65 ntBASIC3.27□□□□□ -1.89
PCF11O94913 MIR3670-1-201ENST00000584160 65 ntBASIC3.27□□□□□ -1.89
PCF11O94913 MIR3670-3-201ENST00000584855 65 ntBASIC3.27□□□□□ -1.89
PCF11O94913 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.27□□□□□ -1.89
PCF11O94913 AC060766.3-201ENST00000591442 263 ntBASIC3.27□□□□□ -1.89
PCF11O94913 MIR3670-4-201ENST00000612260 65 ntBASIC3.27□□□□□ -1.89
PCF11O94913 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCF11O94913 AP003072.4-201ENST00000624580 310 ntBASIC3.27□□□□□ -1.89
PCF11O94913 AC048347.1-201ENST00000624621 427 ntBASIC3.27□□□□□ -1.89
PCF11O94913 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
PCF11O94913 RNF6P1-201ENST00000444889 1784 ntBASIC3.27□□□□□ -1.89
PCF11O94913 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PCF11O94913 AL138799.3-201ENST00000438968 350 ntBASIC3.26□□□□□ -1.89
PCF11O94913 AC009238.1-201ENST00000442165 424 ntBASIC3.26□□□□□ -1.89
PCF11O94913 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.26□□□□□ -1.89
PCF11O94913 AC009237.6-201ENST00000446969 424 ntBASIC3.26□□□□□ -1.89
PCF11O94913 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.26□□□□□ -1.89
PCF11O94913 LRRC37A5P-203ENST00000580181 585 ntBASIC3.26□□□□□ -1.89
PCF11O94913 AL391834.1-201ENST00000609609 560 ntBASIC3.26□□□□□ -1.89
PCF11O94913 AC010297.1-201ENST00000623948 149 ntBASIC3.26□□□□□ -1.89
PCF11O94913 MIR4278-201ENST00000636094 69 ntBASIC3.26□□□□□ -1.89
PCF11O94913 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.26□□□□□ -1.89
PCF11O94913 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PCF11O94913 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.26□□□□□ -1.89
PCF11O94913 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
PCF11O94913 AP001486.2-201ENST00000561652 5113 ntBASIC3.26□□□□□ -1.89
PCF11O94913 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.26□□□□□ -1.89
PCF11O94913 ZNF33CP-201ENST00000432492 2030 ntBASIC3.26□□□□□ -1.89
PCF11O94913 AF127577.6-201ENST00000623352 2191 ntBASIC3.26□□□□□ -1.89
PCF11O94913 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
PCF11O94913 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.25□□□□□ -1.89
PCF11O94913 MIR320B1-201ENST00000390209 79 ntBASIC3.25□□□□□ -1.89
PCF11O94913 RNA5SP498-201ENST00000411342 120 ntBASIC3.25□□□□□ -1.89
PCF11O94913 PRELID3BP11-201ENST00000414230 479 ntBASIC3.25□□□□□ -1.89
PCF11O94913 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.25□□□□□ -1.89
PCF11O94913 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.25□□□□□ -1.89
PCF11O94913 AC003989.2-201ENST00000440224 169 ntBASIC3.25□□□□□ -1.89
PCF11O94913 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.25□□□□□ -1.89
PCF11O94913 AL353898.1-201ENST00000444055 238 ntBASIC3.25□□□□□ -1.89
PCF11O94913 AC140059.1-201ENST00000489238 361 ntBASIC3.25□□□□□ -1.89
PCF11O94913 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.25□□□□□ -1.89
PCF11O94913 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.25□□□□□ -1.89
PCF11O94913 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.25□□□□□ -1.89
PCF11O94913 AC010546.1-201ENST00000569391 485 ntBASIC3.25□□□□□ -1.89
PCF11O94913 MIR5002-201ENST00000584713 97 ntBASIC3.25□□□□□ -1.89
PCF11O94913 AC105429.2-201ENST00000610567 517 ntBASIC3.25□□□□□ -1.89
PCF11O94913 RMST_2.1-201ENST00000617263 136 ntBASIC3.25□□□□□ -1.89
PCF11O94913 AC138649.5-201ENST00000637456 137 ntBASIC3.25□□□□□ -1.89
PCF11O94913 SEPT7P7-201ENST00000420492 1301 ntBASIC3.25□□□□□ -1.89
PCF11O94913 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.25□□□□□ -1.89
PCF11O94913 SNORD65-201ENST00000391079 73 ntBASIC3.25□□□□□ -1.89
PCF11O94913 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.25□□□□□ -1.89
PCF11O94913 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC3.25□□□□□ -1.89
PCF11O94913 OR6C72P-201ENST00000451403 892 ntBASIC3.25□□□□□ -1.89
PCF11O94913 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms