Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RNF40O75150 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.39□□□□□ -1.39
RNF40O75150 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RNF40O75150 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RNF40O75150 SAGE4P-201ENST00000442271 3381 ntBASIC6.39□□□□□ -1.39
RNF40O75150 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
RNF40O75150 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RNF40O75150 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
RNF40O75150 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.39□□□□□ -1.39
RNF40O75150 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF40O75150 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RNF40O75150 MFSD8-219ENST00000641228 2559 ntBASIC6.38□□□□□ -1.39
RNF40O75150 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF40O75150 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF40O75150 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
RNF40O75150 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
RNF40O75150 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
RNF40O75150 SNORA21-201ENST00000362423 132 ntBASIC6.38□□□□□ -1.39
RNF40O75150 RNA5SP273-201ENST00000362484 113 ntBASIC6.38□□□□□ -1.39
RNF40O75150 RNU1-134P-201ENST00000362935 165 ntBASIC6.38□□□□□ -1.39
RNF40O75150 Y_RNA.233-201ENST00000364407 101 ntBASIC6.38□□□□□ -1.39
RNF40O75150 RNU6-102P-201ENST00000384485 104 ntBASIC6.38□□□□□ -1.39
RNF40O75150 SNORD20-201ENST00000384550 80 ntBASIC6.38□□□□□ -1.39
RNF40O75150 U3.35-201ENST00000408405 208 ntBASIC6.38□□□□□ -1.39
RNF40O75150 RNU4-78P-201ENST00000410940 126 ntBASIC6.38□□□□□ -1.39
RNF40O75150 AC016769.2-201ENST00000414815 475 ntBASIC6.38□□□□□ -1.39
RNF40O75150 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC6.38□□□□□ -1.39
RNF40O75150 AC234781.4-201ENST00000419384 244 ntBASIC6.38□□□□□ -1.39
RNF40O75150 RPL12P12-201ENST00000424633 501 ntBASIC6.38□□□□□ -1.39
RNF40O75150 VTI1BP4-201ENST00000427516 527 ntBASIC6.38□□□□□ -1.39
RNF40O75150 AC099670.2-201ENST00000435130 321 ntBASIC6.38□□□□□ -1.39
RNF40O75150 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC6.38□□□□□ -1.39
RNF40O75150 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.38□□□□□ -1.39
RNF40O75150 AC010655.1-201ENST00000449336 292 ntBASIC6.38□□□□□ -1.39
RNF40O75150 AC010733.1-201ENST00000451515 401 ntBASIC6.38□□□□□ -1.39
RNF40O75150 AL133244.1-201ENST00000456007 258 ntBASIC6.38□□□□□ -1.39
RNF40O75150 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.38□□□□□ -1.39
RNF40O75150 AC010631.1-201ENST00000474150 156 ntBASIC6.38□□□□□ -1.39
RNF40O75150 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC6.38□□□□□ -1.39
RNF40O75150 RPS4XP20-201ENST00000505751 772 ntBASIC6.38□□□□□ -1.39
RNF40O75150 TOMM22P4-201ENST00000511318 336 ntBASIC6.38□□□□□ -1.39
RNF40O75150 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.38□□□□□ -1.39
RNF40O75150 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC6.38□□□□□ -1.39
RNF40O75150 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.38□□□□□ -1.39
RNF40O75150 SNORD116-28-201ENST00000516123 91 ntBASIC6.38□□□□□ -1.39
RNF40O75150 RNU6-496P-201ENST00000516145 99 ntBASIC6.38□□□□□ -1.39
RNF40O75150 Y_RNA.667-201ENST00000516212 107 ntBASIC6.38□□□□□ -1.39
RNF40O75150 IGHVII-62-1-201ENST00000519283 235 ntBASIC6.38□□□□□ -1.39
RNF40O75150 AL442163.3-201ENST00000554110 156 ntBASIC6.38□□□□□ -1.39
RNF40O75150 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC6.38□□□□□ -1.39
RNF40O75150 OR1F2P-201ENST00000570470 933 ntBASIC6.38□□□□□ -1.39
RNF40O75150 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.38□□□□□ -1.39
RNF40O75150 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.38□□□□□ -1.39
RNF40O75150 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC6.38□□□□□ -1.39
RNF40O75150 AC098826.3-201ENST00000603823 466 ntBASIC6.38□□□□□ -1.39
RNF40O75150 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC6.38□□□□□ -1.39
RNF40O75150 CENPF-206ENST00000614578 528 ntTSL 5 BASIC6.38□□□□□ -1.39
RNF40O75150 AC127024.6-201ENST00000621598 424 ntBASIC6.38□□□□□ -1.39
RNF40O75150 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.38□□□□□ -1.39
RNF40O75150 AC079776.5-201ENST00000641920 211 ntBASIC6.38□□□□□ -1.39
RNF40O75150 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
RNF40O75150 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RNF40O75150 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
RNF40O75150 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.38□□□□□ -1.39
RNF40O75150 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RNF40O75150 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RNF40O75150 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RNF40O75150 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RNF40O75150 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
RNF40O75150 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
RNF40O75150 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RNF40O75150 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RNF40O75150 AC008725.1-201ENST00000605123 2263 ntBASIC6.37□□□□□ -1.39
RNF40O75150 BX322639.1-202ENST00000423987 2213 ntBASIC6.37□□□□□ -1.39
RNF40O75150 AC007785.2-201ENST00000598627 1916 ntBASIC6.37□□□□□ -1.39
RNF40O75150 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RNF40O75150 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RNF40O75150 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RNF40O75150 MIR137-201ENST00000385223 102 ntBASIC6.37□□□□□ -1.39
RNF40O75150 RNU6-700P-201ENST00000391043 107 ntBASIC6.37□□□□□ -1.39
RNF40O75150 AL590704.1-201ENST00000402856 794 ntBASIC6.37□□□□□ -1.39
RNF40O75150 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.37□□□□□ -1.39
RNF40O75150 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.37□□□□□ -1.39
RNF40O75150 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.37□□□□□ -1.39
RNF40O75150 AC079355.1-201ENST00000421770 223 ntBASIC6.37□□□□□ -1.39
RNF40O75150 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.37□□□□□ -1.39
RNF40O75150 VPS25P1-201ENST00000455691 508 ntBASIC6.37□□□□□ -1.39
RNF40O75150 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.37□□□□□ -1.39
RNF40O75150 HMGB1P25-201ENST00000468402 607 ntBASIC6.37□□□□□ -1.39
RNF40O75150 AC114781.3-201ENST00000512083 142 ntBASIC6.37□□□□□ -1.39
RNF40O75150 AC074133.1-201ENST00000515696 183 ntBASIC6.37□□□□□ -1.39
RNF40O75150 RNU6-347P-201ENST00000516658 105 ntBASIC6.37□□□□□ -1.39
RNF40O75150 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.37□□□□□ -1.39
RNF40O75150 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.37□□□□□ -1.39
RNF40O75150 AC120057.2-201ENST00000571520 271 ntBASIC6.37□□□□□ -1.39
RNF40O75150 AC108706.1-201ENST00000611053 297 ntBASIC6.37□□□□□ -1.39
RNF40O75150 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC6.37□□□□□ -1.39
RNF40O75150 TUG1_2.1-201ENST00000614234 87 ntBASIC6.37□□□□□ -1.39
RNF40O75150 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RNF40O75150 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms