Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AC092001.1-201ENST00000453012 261 ntBASIC3.67□□□□□ -1.82
LDB3O75112 AC091564.1-201ENST00000464563 479 ntBASIC3.67□□□□□ -1.82
LDB3O75112 PLGLA-201ENST00000465668 449 ntBASIC3.67□□□□□ -1.82
LDB3O75112 PABPC1P3-201ENST00000469174 459 ntBASIC3.67□□□□□ -1.82
LDB3O75112 RPL31P50-201ENST00000471002 296 ntBASIC3.67□□□□□ -1.82
LDB3O75112 AC017015.1-201ENST00000477387 286 ntBASIC3.67□□□□□ -1.82
LDB3O75112 VN1R105P-201ENST00000486595 910 ntBASIC3.67□□□□□ -1.82
LDB3O75112 AC106872.3-201ENST00000495104 446 ntBASIC3.67□□□□□ -1.82
LDB3O75112 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.67□□□□□ -1.82
LDB3O75112 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.67□□□□□ -1.82
LDB3O75112 POU5F1P7-201ENST00000508759 541 ntBASIC3.67□□□□□ -1.82
LDB3O75112 AC098799.2-201ENST00000509466 868 ntBASIC3.67□□□□□ -1.82
LDB3O75112 AC022483.1-201ENST00000514020 567 ntBASIC3.67□□□□□ -1.82
LDB3O75112 RNU6-507P-201ENST00000516045 100 ntBASIC3.67□□□□□ -1.82
LDB3O75112 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.67□□□□□ -1.82
LDB3O75112 IGLVIV-53-201ENST00000520107 367 ntBASIC3.67□□□□□ -1.82
LDB3O75112 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.67□□□□□ -1.82
LDB3O75112 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDB3O75112 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.67□□□□□ -1.82
LDB3O75112 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.67□□□□□ -1.82
LDB3O75112 AL121579.1-201ENST00000555129 305 ntBASIC3.67□□□□□ -1.82
LDB3O75112 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.67□□□□□ -1.82
LDB3O75112 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.67□□□□□ -1.82
LDB3O75112 AC053481.4-201ENST00000583164 216 ntBASIC3.67□□□□□ -1.82
LDB3O75112 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.67□□□□□ -1.82
LDB3O75112 AC005255.1-201ENST00000593748 216 ntBASIC3.67□□□□□ -1.82
LDB3O75112 VN1R85P-201ENST00000601587 426 ntBASIC3.67□□□□□ -1.82
LDB3O75112 AL356055.1-201ENST00000602528 446 ntBASIC3.67□□□□□ -1.82
LDB3O75112 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.67□□□□□ -1.82
LDB3O75112 MIR4727-201ENST00000622232 55 ntBASIC3.67□□□□□ -1.82
LDB3O75112 CR381653.2-201ENST00000624041 768 ntBASIC3.67□□□□□ -1.82
LDB3O75112 AC067931.1-201ENST00000624190 671 ntBASIC3.67□□□□□ -1.82
LDB3O75112 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.67□□□□□ -1.82
LDB3O75112 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
LDB3O75112 AL022578.1-201ENST00000439330 1433 ntBASIC3.67□□□□□ -1.82
LDB3O75112 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.67□□□□□ -1.82
LDB3O75112 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LDB3O75112 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDB3O75112 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.67□□□□□ -1.82
LDB3O75112 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDB3O75112 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDB3O75112 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LDB3O75112 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LDB3O75112 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LDB3O75112 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
LDB3O75112 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
LDB3O75112 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
LDB3O75112 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LDB3O75112 RNA5SP97-201ENST00000365006 84 ntBASIC3.66□□□□□ -1.82
LDB3O75112 RN7SKP266-201ENST00000410232 287 ntBASIC3.66□□□□□ -1.82
LDB3O75112 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.66□□□□□ -1.82
LDB3O75112 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.66□□□□□ -1.82
LDB3O75112 MTATP6P27-201ENST00000416987 621 ntBASIC3.66□□□□□ -1.82
LDB3O75112 AC012065.2-201ENST00000421295 375 ntBASIC3.66□□□□□ -1.82
LDB3O75112 MTCO2P5-201ENST00000422621 426 ntBASIC3.66□□□□□ -1.82
LDB3O75112 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.66□□□□□ -1.82
LDB3O75112 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.66□□□□□ -1.82
LDB3O75112 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.66□□□□□ -1.82
LDB3O75112 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.66□□□□□ -1.82
LDB3O75112 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LDB3O75112 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.66□□□□□ -1.82
LDB3O75112 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.66□□□□□ -1.82
LDB3O75112 RPS29P7-201ENST00000439662 171 ntBASIC3.66□□□□□ -1.82
LDB3O75112 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.66□□□□□ -1.82
LDB3O75112 HSPE1P28-201ENST00000443139 211 ntBASIC3.66□□□□□ -1.82
LDB3O75112 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.66□□□□□ -1.82
LDB3O75112 RPS17P13-201ENST00000448974 407 ntBASIC3.66□□□□□ -1.82
LDB3O75112 AL359385.1-201ENST00000456509 365 ntBASIC3.66□□□□□ -1.82
LDB3O75112 AC013267.1-201ENST00000458227 267 ntBASIC3.66□□□□□ -1.82
LDB3O75112 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.66□□□□□ -1.82
LDB3O75112 RPL21P11-201ENST00000461458 483 ntBASIC3.66□□□□□ -1.82
LDB3O75112 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.66□□□□□ -1.82
LDB3O75112 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
LDB3O75112 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.66□□□□□ -1.82
LDB3O75112 PRDX4P1-201ENST00000507189 574 ntBASIC3.66□□□□□ -1.82
LDB3O75112 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.66□□□□□ -1.82
LDB3O75112 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
LDB3O75112 AC024589.1-201ENST00000512207 263 ntBASIC3.66□□□□□ -1.82
LDB3O75112 AC074344.1-201ENST00000512823 224 ntBASIC3.66□□□□□ -1.82
LDB3O75112 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.66□□□□□ -1.82
LDB3O75112 AP004247.1-201ENST00000531556 1289 ntBASIC3.66□□□□□ -1.82
LDB3O75112 AC118273.2-201ENST00000532092 465 ntBASIC3.66□□□□□ -1.82
LDB3O75112 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.66□□□□□ -1.82
LDB3O75112 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.66□□□□□ -1.82
LDB3O75112 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LDB3O75112 SNORA59B-202ENST00000578183 701 ntBASIC3.66□□□□□ -1.82
LDB3O75112 RN7SL703P-201ENST00000578485 302 ntBASIC3.66□□□□□ -1.82
LDB3O75112 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.66□□□□□ -1.82
LDB3O75112 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.66□□□□□ -1.82
LDB3O75112 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.66□□□□□ -1.82
LDB3O75112 BNIP3P23-201ENST00000599655 511 ntBASIC3.66□□□□□ -1.82
LDB3O75112 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.66□□□□□ -1.82
LDB3O75112 AL161729.4-201ENST00000604650 476 ntBASIC3.66□□□□□ -1.82
LDB3O75112 AL022154.1-201ENST00000604698 785 ntBASIC3.66□□□□□ -1.82
LDB3O75112 AC097468.3-201ENST00000607956 456 ntBASIC3.66□□□□□ -1.82
LDB3O75112 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.66□□□□□ -1.82
LDB3O75112 AC131902.3-201ENST00000611767 581 ntBASIC3.66□□□□□ -1.82
LDB3O75112 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.66□□□□□ -1.82
LDB3O75112 MIR3688-2-201ENST00000636963 87 ntBASIC3.66□□□□□ -1.82
LDB3O75112 AC099654.10-201ENST00000640395 161 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms