Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL122126.1-201ENST00000546905 1318 ntBASIC3.94□□□□□ -1.78
SMAD6O43541 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.94□□□□□ -1.78
SMAD6O43541 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
SMAD6O43541 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SMAD6O43541 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SMAD6O43541 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.93□□□□□ -1.78
SMAD6O43541 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMAD6O43541 Y_RNA.9-201ENST00000362354 101 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 Y_RNA.61-201ENST00000362835 102 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 RNU6-492P-201ENST00000363035 104 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 RNA5SP391-201ENST00000363456 119 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 Y_RNA.372-201ENST00000365599 102 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SMAD6O43541 Y_RNA.453-201ENST00000384223 109 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 SNORD116-23-201ENST00000384645 92 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 SNORA3.3-201ENST00000408712 125 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 RPL7P30-201ENST00000420888 709 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 AC245054.1-201ENST00000420944 258 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 AL391219.1-201ENST00000422570 483 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.93□□□□□ -1.78
SMAD6O43541 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.93□□□□□ -1.78
SMAD6O43541 MTND4LP10-201ENST00000435146 291 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.93□□□□□ -1.78
SMAD6O43541 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.93□□□□□ -1.78
SMAD6O43541 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.93□□□□□ -1.78
SMAD6O43541 RPS17P13-201ENST00000448974 407 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 PSPHP1-201ENST00000450062 261 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 HMGB3P22-202ENST00000451823 572 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 AL033528.1-201ENST00000453780 140 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 RPL21P11-201ENST00000461458 483 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 RPS20P21-201ENST00000466859 343 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 RPS27P23-201ENST00000487608 251 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 AC078918.1-201ENST00000498515 228 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.93□□□□□ -1.78
SMAD6O43541 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.93□□□□□ -1.78
SMAD6O43541 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.93□□□□□ -1.78
SMAD6O43541 AC010342.1-201ENST00000514047 877 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 RNU6-1261P-201ENST00000517194 104 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 AC022695.1-201ENST00000522089 237 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.93□□□□□ -1.78
SMAD6O43541 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SMAD6O43541 SLC2A13P1-201ENST00000531560 322 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 OR6C73P-201ENST00000546432 358 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 CYCSP30-201ENST00000546447 172 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 AC004217.3-201ENST00000551552 878 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.93□□□□□ -1.78
SMAD6O43541 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.93□□□□□ -1.78
SMAD6O43541 AC087499.8-201ENST00000578406 226 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 C8orf59P2-201ENST00000603441 271 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 AC131902.3-201ENST00000611767 581 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 AL359535.1-201ENST00000612100 1087 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 AC104260.1-201ENST00000616660 539 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 AC012150.2-201ENST00000621300 544 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 CRYM-AS1-204ENST00000637983 556 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
SMAD6O43541 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SMAD6O43541 MTND5P3-201ENST00000438536 1800 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.93□□□□□ -1.78
SMAD6O43541 AC018555.1-201ENST00000567548 1980 ntBASIC3.93□□□□□ -1.78
SMAD6O43541 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
SMAD6O43541 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
SMAD6O43541 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
SMAD6O43541 GABPAP-201ENST00000419271 1356 ntBASIC3.92□□□□□ -1.78
SMAD6O43541 MTND4P23-201ENST00000447723 1363 ntBASIC3.92□□□□□ -1.78
SMAD6O43541 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SMAD6O43541 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SMAD6O43541 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SMAD6O43541 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.92□□□□□ -1.78
SMAD6O43541 OR4A15-201ENST00000314706 1035 ntBASIC3.92□□□□□ -1.78
SMAD6O43541 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
SMAD6O43541 U8.11-201ENST00000384699 133 ntBASIC3.92□□□□□ -1.78
SMAD6O43541 U8.12-201ENST00000384701 133 ntBASIC3.92□□□□□ -1.78
SMAD6O43541 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SMAD6O43541 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SMAD6O43541 AL590002.1-201ENST00000406554 418 ntBASIC3.92□□□□□ -1.78
SMAD6O43541 FCF1P10-201ENST00000407590 479 ntBASIC3.92□□□□□ -1.78
SMAD6O43541 RN7SKP156-201ENST00000410308 342 ntBASIC3.92□□□□□ -1.78
SMAD6O43541 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.92□□□□□ -1.78
SMAD6O43541 HMGB1P11-201ENST00000413899 637 ntBASIC3.92□□□□□ -1.78
SMAD6O43541 OR51A5P-201ENST00000415429 942 ntBASIC3.92□□□□□ -1.78
SMAD6O43541 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.92□□□□□ -1.78
SMAD6O43541 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.92□□□□□ -1.78
SMAD6O43541 AL139413.1-201ENST00000421309 217 ntBASIC3.92□□□□□ -1.78
SMAD6O43541 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.92□□□□□ -1.78
SMAD6O43541 RPS27AP14-201ENST00000422868 454 ntBASIC3.92□□□□□ -1.78
SMAD6O43541 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.92□□□□□ -1.78
SMAD6O43541 AL356583.2-201ENST00000426536 280 ntBASIC3.92□□□□□ -1.78
SMAD6O43541 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.92□□□□□ -1.78
SMAD6O43541 BMS1P19-201ENST00000433925 393 ntBASIC3.92□□□□□ -1.78
SMAD6O43541 MTND4LP16-201ENST00000440828 295 ntBASIC3.92□□□□□ -1.78
SMAD6O43541 RAB11AP1-201ENST00000442978 646 ntBASIC3.92□□□□□ -1.78
SMAD6O43541 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SMAD6O43541 AP000542.1-201ENST00000448473 371 ntBASIC3.92□□□□□ -1.78
SMAD6O43541 RPL29P29-201ENST00000448725 423 ntBASIC3.92□□□□□ -1.78
SMAD6O43541 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.92□□□□□ -1.78
SMAD6O43541 RPL18AP17-201ENST00000455326 198 ntBASIC3.92□□□□□ -1.78
SMAD6O43541 SNORA84-201ENST00000459229 133 ntBASIC3.92□□□□□ -1.78
SMAD6O43541 U8.18-201ENST00000459285 133 ntBASIC3.92□□□□□ -1.78
SMAD6O43541 AC015724.1-201ENST00000478577 156 ntBASIC3.92□□□□□ -1.78
SMAD6O43541 AC008628.2-201ENST00000502605 298 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 205.3 ms