Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.58□□□□□ -1.68
PRPF3O43395 SEPT7P9-203ENST00000604116 343 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.58□□□□□ -1.68
PRPF3O43395 AC128687.2-201ENST00000609657 566 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 AC006023.2-201ENST00000609916 167 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 AP000254.1-201ENST00000609934 520 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 BX664608.1-201ENST00000610519 487 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 AC090970.3-201ENST00000612566 866 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 AC093838.1-201ENST00000613014 469 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 ZYXP1-201ENST00000617638 118 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 AL158801.5-201ENST00000623123 465 ntBASIC4.58□□□□□ -1.68
PRPF3O43395 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
PRPF3O43395 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF3O43395 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PRPF3O43395 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.58□□□□□ -1.68
PRPF3O43395 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PRPF3O43395 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.57□□□□□ -1.68
PRPF3O43395 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PRPF3O43395 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PRPF3O43395 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PRPF3O43395 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.57□□□□□ -1.68
PRPF3O43395 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PRPF3O43395 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.57□□□□□ -1.68
PRPF3O43395 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.57□□□□□ -1.68
PRPF3O43395 DDX10P1-201ENST00000448545 1933 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.57□□□□□ -1.68
PRPF3O43395 OR5H15-201ENST00000383696 930 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 RNU4-65P-201ENST00000410473 140 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 RN7SKP177-201ENST00000410567 355 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 RNU2-16P-201ENST00000410712 136 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 RNU2-62P-201ENST00000410868 191 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 RPS3AP3-201ENST00000411933 242 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 RPL7AP73-201ENST00000413490 353 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 JKAMPP1-201ENST00000413804 919 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PRPF3O43395 AC004866.2-201ENST00000438285 481 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 AC093156.1-201ENST00000440382 670 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 PGBD4P3-201ENST00000440731 581 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 AC092473.1-201ENST00000441098 221 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 AL162151.2-201ENST00000448875 158 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.57□□□□□ -1.68
PRPF3O43395 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.57□□□□□ -1.68
PRPF3O43395 RPL7P15-201ENST00000461190 712 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 AC055855.1-201ENST00000489563 579 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.57□□□□□ -1.68
PRPF3O43395 HMGB1P22-201ENST00000505315 124 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.57□□□□□ -1.68
PRPF3O43395 AC022616.6-201ENST00000520479 119 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.57□□□□□ -1.68
PRPF3O43395 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
PRPF3O43395 VN1R79P-201ENST00000593540 513 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 XIAPP1-201ENST00000603162 600 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 AL451086.1-201ENST00000605596 223 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 AL139286.2-201ENST00000606838 396 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 AC090425.2-201ENST00000608818 501 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PRPF3O43395 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 AC138932.5-201ENST00000617759 563 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 AC233309.1-201ENST00000619522 751 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 AL360181.4-201ENST00000621752 134 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 TAB3P1-202ENST00000452645 1634 ntBASIC4.57□□□□□ -1.68
PRPF3O43395 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PRPF3O43395 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PRPF3O43395 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 RNU4-75P-201ENST00000364621 146 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 RNA5SP283-201ENST00000365604 119 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PRPF3O43395 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
PRPF3O43395 RNU6-1119P-201ENST00000384349 108 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 RNU6-278P-201ENST00000390945 109 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.56□□□□□ -1.68
PRPF3O43395 RAC1P3-201ENST00000416129 580 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.56□□□□□ -1.68
PRPF3O43395 ZNF885P-201ENST00000420174 1098 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 DUTP6-201ENST00000425573 462 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 AC137499.1-201ENST00000427602 88 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 MTND1P34-201ENST00000438556 671 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 RPL21P89-201ENST00000444021 467 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.56□□□□□ -1.68
PRPF3O43395 MTCO2P29-201ENST00000465212 189 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.56□□□□□ -1.68
PRPF3O43395 RPS26P15-201ENST00000488067 348 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 AC110792.1-201ENST00000491826 472 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 AC139783.2-201ENST00000504847 1145 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.56□□□□□ -1.68
PRPF3O43395 MLLT10P2-201ENST00000506434 249 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 AC021146.1-201ENST00000511202 716 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.56□□□□□ -1.68
PRPF3O43395 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.56□□□□□ -1.68
PRPF3O43395 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.56□□□□□ -1.68
PRPF3O43395 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.56□□□□□ -1.68
PRPF3O43395 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.56□□□□□ -1.68
PRPF3O43395 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.56□□□□□ -1.68
PRPF3O43395 AL356432.3-201ENST00000568952 465 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.56□□□□□ -1.68
PRPF3O43395 AC009977.1-201ENST00000586015 570 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 CKS1BP3-201ENST00000600888 237 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 KC877982.1-201ENST00000602313 470 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 AC020910.2-201ENST00000603635 610 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms