Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 BNIP3P22-201ENST00000593399 556 ntBASIC5.19□□□□□ -1.58
SRGAP3O43295 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SRGAP3O43295 AC064801.1-201ENST00000612025 407 ntBASIC5.19□□□□□ -1.58
SRGAP3O43295 AC078899.5-201ENST00000612475 178 ntBASIC5.19□□□□□ -1.58
SRGAP3O43295 DISC2.1-201ENST00000612827 205 ntBASIC5.19□□□□□ -1.58
SRGAP3O43295 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
SRGAP3O43295 SNX18P1Y-201ENST00000616231 511 ntBASIC5.19□□□□□ -1.58
SRGAP3O43295 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
SRGAP3O43295 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.19□□□□□ -1.58
SRGAP3O43295 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.19□□□□□ -1.58
SRGAP3O43295 AC138649.5-201ENST00000637456 137 ntBASIC5.19□□□□□ -1.58
SRGAP3O43295 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SRGAP3O43295 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SRGAP3O43295 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SRGAP3O43295 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SRGAP3O43295 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SRGAP3O43295 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.19□□□□□ -1.58
SRGAP3O43295 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SRGAP3O43295 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRGAP3O43295 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.18□□□□□ -1.58
SRGAP3O43295 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRGAP3O43295 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
SRGAP3O43295 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.18□□□□□ -1.58
SRGAP3O43295 MAPK10-304ENST00000641341 3984 ntBASIC5.18□□□□□ -1.58
SRGAP3O43295 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRGAP3O43295 ZBTB8OSP1-201ENST00000342688 498 ntBASIC5.18□□□□□ -1.58
SRGAP3O43295 RNU6-223P-201ENST00000362830 107 ntBASIC5.18□□□□□ -1.58
SRGAP3O43295 Y_RNA.138-201ENST00000363462 102 ntBASIC5.18□□□□□ -1.58
SRGAP3O43295 RNU6-359P-201ENST00000365466 108 ntBASIC5.18□□□□□ -1.58
SRGAP3O43295 Y_RNA.431-201ENST00000384086 102 ntBASIC5.18□□□□□ -1.58
SRGAP3O43295 TPMTP2-201ENST00000414372 726 ntBASIC5.18□□□□□ -1.58
SRGAP3O43295 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.18□□□□□ -1.58
SRGAP3O43295 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SRGAP3O43295 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SRGAP3O43295 RPL23AP89-201ENST00000439324 255 ntBASIC5.18□□□□□ -1.58
SRGAP3O43295 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SRGAP3O43295 FAM103A2P-201ENST00000444122 354 ntBASIC5.18□□□□□ -1.58
SRGAP3O43295 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.18□□□□□ -1.58
SRGAP3O43295 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.18□□□□□ -1.58
SRGAP3O43295 RPS20P32-201ENST00000456044 356 ntBASIC5.18□□□□□ -1.58
SRGAP3O43295 RNU6-261P-201ENST00000459506 102 ntBASIC5.18□□□□□ -1.58
SRGAP3O43295 RPL31P50-201ENST00000471002 296 ntBASIC5.18□□□□□ -1.58
SRGAP3O43295 RPS3AP50-201ENST00000487064 803 ntBASIC5.18□□□□□ -1.58
SRGAP3O43295 AP001025.2-201ENST00000490908 477 ntBASIC5.18□□□□□ -1.58
SRGAP3O43295 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.18□□□□□ -1.58
SRGAP3O43295 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.18□□□□□ -1.58
SRGAP3O43295 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC5.18□□□□□ -1.58
SRGAP3O43295 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.18□□□□□ -1.58
SRGAP3O43295 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.18□□□□□ -1.58
SRGAP3O43295 RNU6-1045P-201ENST00000516321 107 ntBASIC5.18□□□□□ -1.58
SRGAP3O43295 RNU6-201P-201ENST00000517100 61 ntBASIC5.18□□□□□ -1.58
SRGAP3O43295 AC104986.1-201ENST00000517978 436 ntBASIC5.18□□□□□ -1.58
SRGAP3O43295 AC022861.1-201ENST00000522981 663 ntBASIC5.18□□□□□ -1.58
SRGAP3O43295 AC063950.1-201ENST00000552036 308 ntBASIC5.18□□□□□ -1.58
SRGAP3O43295 HSPE1P3-201ENST00000559254 309 ntBASIC5.18□□□□□ -1.58
SRGAP3O43295 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.18□□□□□ -1.58
SRGAP3O43295 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.18□□□□□ -1.58
SRGAP3O43295 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.18□□□□□ -1.58
SRGAP3O43295 AL591034.3-201ENST00000605511 685 ntBASIC5.18□□□□□ -1.58
SRGAP3O43295 OR10AB1P-201ENST00000609613 938 ntBASIC5.18□□□□□ -1.58
SRGAP3O43295 AC055839.1-201ENST00000634467 498 ntBASIC5.18□□□□□ -1.58
SRGAP3O43295 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRGAP3O43295 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRGAP3O43295 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRGAP3O43295 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRGAP3O43295 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRGAP3O43295 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SRGAP3O43295 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.18□□□□□ -1.58
SRGAP3O43295 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SRGAP3O43295 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.17□□□□□ -1.58
SRGAP3O43295 NUP58P1-201ENST00000502546 1738 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SRGAP3O43295 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.17□□□□□ -1.58
SRGAP3O43295 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SRGAP3O43295 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SRGAP3O43295 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SRGAP3O43295 RNU1-85P-201ENST00000364127 164 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 SNORA20.2-201ENST00000383922 131 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SRGAP3O43295 RPS26P8-201ENST00000393490 348 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 AL121834.1-202ENST00000404494 277 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 BTBD10P2-201ENST00000404779 676 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 AL162578.1-201ENST00000406202 378 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 RNU2-9P-201ENST00000410194 145 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 PRELID3BP11-201ENST00000414230 479 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.17□□□□□ -1.58
SRGAP3O43295 AC008280.1-201ENST00000418851 412 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 EIF4EP1-201ENST00000422311 642 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.17□□□□□ -1.58
SRGAP3O43295 MTCYBP6-201ENST00000441810 138 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.17□□□□□ -1.58
SRGAP3O43295 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.17□□□□□ -1.58
SRGAP3O43295 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.17□□□□□ -1.58
SRGAP3O43295 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.17□□□□□ -1.58
SRGAP3O43295 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.17□□□□□ -1.58
SRGAP3O43295 AC103851.1-201ENST00000506833 274 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 RNU7-30P-201ENST00000516835 62 ntBASIC5.17□□□□□ -1.58
SRGAP3O43295 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.17□□□□□ -1.58
SRGAP3O43295 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.17□□□□□ -1.58
SRGAP3O43295 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms