Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 USP9YP21-201ENST00000420603 432 ntBASIC3.28□□□□□ -1.88
CLDN3O15551 AC233728.2-201ENST00000425348 757 ntBASIC3.28□□□□□ -1.88
CLDN3O15551 OR2AS1P-201ENST00000427827 319 ntBASIC3.28□□□□□ -1.88
CLDN3O15551 AC022018.1-201ENST00000430685 241 ntBASIC3.28□□□□□ -1.88
CLDN3O15551 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.28□□□□□ -1.88
CLDN3O15551 AC112492.1-201ENST00000449607 712 ntBASIC3.28□□□□□ -1.88
CLDN3O15551 AC140076.1-201ENST00000449897 361 ntBASIC3.28□□□□□ -1.88
CLDN3O15551 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.28□□□□□ -1.88
CLDN3O15551 UQCRHP3-201ENST00000451503 251 ntBASIC3.28□□□□□ -1.88
CLDN3O15551 USP9YP34-201ENST00000453983 808 ntBASIC3.28□□□□□ -1.88
CLDN3O15551 PNPLA4P1-201ENST00000458328 305 ntBASIC3.28□□□□□ -1.88
CLDN3O15551 RPL7P5-201ENST00000471472 736 ntBASIC3.28□□□□□ -1.88
CLDN3O15551 AC117440.1-201ENST00000474107 571 ntBASIC3.28□□□□□ -1.88
CLDN3O15551 AC104629.1-201ENST00000494226 508 ntBASIC3.28□□□□□ -1.88
CLDN3O15551 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.28□□□□□ -1.88
CLDN3O15551 PRELID3BP6-201ENST00000503839 571 ntBASIC3.28□□□□□ -1.88
CLDN3O15551 SUMO2P5-201ENST00000506790 245 ntBASIC3.28□□□□□ -1.88
CLDN3O15551 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.28□□□□□ -1.88
CLDN3O15551 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.28□□□□□ -1.88
CLDN3O15551 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.28□□□□□ -1.88
CLDN3O15551 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN3O15551 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.28□□□□□ -1.88
CLDN3O15551 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.28□□□□□ -1.88
CLDN3O15551 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.28□□□□□ -1.88
CLDN3O15551 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.28□□□□□ -1.88
CLDN3O15551 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.28□□□□□ -1.88
CLDN3O15551 AL031176.1-201ENST00000604554 466 ntBASIC3.28□□□□□ -1.88
CLDN3O15551 AC005332.6-201ENST00000613178 446 ntBASIC3.28□□□□□ -1.88
CLDN3O15551 AC010975.3-201ENST00000618727 978 ntBASIC3.28□□□□□ -1.88
CLDN3O15551 AL356585.4-201ENST00000623078 1229 ntBASIC3.28□□□□□ -1.88
CLDN3O15551 AC090897.3-201ENST00000636973 1157 ntBASIC3.28□□□□□ -1.88
CLDN3O15551 AC010733.2-201ENST00000589496 5702 ntBASIC3.28□□□□□ -1.88
CLDN3O15551 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLDN3O15551 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN3O15551 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN3O15551 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN3O15551 MIR506-201ENST00000384998 124 ntBASIC3.27□□□□□ -1.89
CLDN3O15551 RNU6-1077P-201ENST00000410506 102 ntBASIC3.27□□□□□ -1.89
CLDN3O15551 Z92545.1-201ENST00000411782 234 ntBASIC3.27□□□□□ -1.89
CLDN3O15551 RPS15AP38-201ENST00000413110 372 ntBASIC3.27□□□□□ -1.89
CLDN3O15551 MRPL50P2-201ENST00000416821 482 ntBASIC3.27□□□□□ -1.89
CLDN3O15551 MTND4P3-201ENST00000417829 541 ntBASIC3.27□□□□□ -1.89
CLDN3O15551 AC019178.2-201ENST00000423595 505 ntBASIC3.27□□□□□ -1.89
CLDN3O15551 RPL23AP74-201ENST00000437246 471 ntBASIC3.27□□□□□ -1.89
CLDN3O15551 MUPP-201ENST00000438111 566 ntBASIC3.27□□□□□ -1.89
CLDN3O15551 AC004866.2-201ENST00000438285 481 ntBASIC3.27□□□□□ -1.89
CLDN3O15551 AC092427.1-201ENST00000439177 601 ntBASIC3.27□□□□□ -1.89
CLDN3O15551 HSPE1P28-201ENST00000443139 211 ntBASIC3.27□□□□□ -1.89
CLDN3O15551 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CLDN3O15551 AC011825.1-201ENST00000484967 388 ntBASIC3.27□□□□□ -1.89
CLDN3O15551 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CLDN3O15551 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.27□□□□□ -1.89
CLDN3O15551 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.27□□□□□ -1.89
CLDN3O15551 COX7A2P2-201ENST00000505291 250 ntBASIC3.27□□□□□ -1.89
CLDN3O15551 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.27□□□□□ -1.89
CLDN3O15551 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.27□□□□□ -1.89
CLDN3O15551 OR4H12P-201ENST00000556269 907 ntBASIC3.27□□□□□ -1.89
CLDN3O15551 AP005205.1-201ENST00000563503 508 ntBASIC3.27□□□□□ -1.89
CLDN3O15551 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.27□□□□□ -1.89
CLDN3O15551 AC007318.2-201ENST00000620999 243 ntBASIC3.27□□□□□ -1.89
CLDN3O15551 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.27□□□□□ -1.89
CLDN3O15551 OR4G11P-202ENST00000642116 1414 ntBASIC3.27□□□□□ -1.89
CLDN3O15551 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.27□□□□□ -1.89
CLDN3O15551 AC107982.1-201ENST00000507171 1300 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CLDN3O15551 RNU6-1155P-201ENST00000363554 107 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CLDN3O15551 MIR493-201ENST00000385254 89 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 SAR1AP2-201ENST00000392696 594 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 FAT1P1-201ENST00000406588 507 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 U3.42-201ENST00000408746 214 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 AC096664.2-201ENST00000411843 406 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.26□□□□□ -1.89
CLDN3O15551 RPL7P30-201ENST00000420888 709 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN3O15551 RPL7P44-201ENST00000424827 742 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.26□□□□□ -1.89
CLDN3O15551 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 RPL39P6-201ENST00000448289 150 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 RPL36AP33-201ENST00000450395 310 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.26□□□□□ -1.89
CLDN3O15551 OFD1P3Y-201ENST00000453312 783 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.26□□□□□ -1.89
CLDN3O15551 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.26□□□□□ -1.89
CLDN3O15551 AC091179.1-201ENST00000461606 579 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 RPL7P23-201ENST00000493874 747 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 AC069306.1-201ENST00000507006 843 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 SNORD59.2-201ENST00000516873 68 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.26□□□□□ -1.89
CLDN3O15551 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.26□□□□□ -1.89
CLDN3O15551 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.26□□□□□ -1.89
CLDN3O15551 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.26□□□□□ -1.89
CLDN3O15551 CR383656.7-201ENST00000548164 174 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 AC125611.1-201ENST00000549563 229 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.26□□□□□ -1.89
CLDN3O15551 MAGOH2P-202ENST00000584384 429 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 AC012443.1-201ENST00000605605 231 ntBASIC3.26□□□□□ -1.89
CLDN3O15551 AC093673.2-201ENST00000609674 331 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms