Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.57□□□□□ -1.84
SMAD9O15198 AC091516.1-201ENST00000549191 703 ntBASIC3.57□□□□□ -1.84
SMAD9O15198 SETP2-201ENST00000553886 926 ntBASIC3.57□□□□□ -1.84
SMAD9O15198 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.57□□□□□ -1.84
SMAD9O15198 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.57□□□□□ -1.84
SMAD9O15198 MIR4429-201ENST00000580105 73 ntBASIC3.57□□□□□ -1.84
SMAD9O15198 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.57□□□□□ -1.84
SMAD9O15198 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.57□□□□□ -1.84
SMAD9O15198 AC020914.4-201ENST00000597690 277 ntBASIC3.57□□□□□ -1.84
SMAD9O15198 AL358072.1-201ENST00000604156 575 ntBASIC3.57□□□□□ -1.84
SMAD9O15198 XIST_intron.1-201ENST00000619444 68 ntBASIC3.57□□□□□ -1.84
SMAD9O15198 U6.98-201ENST00000637157 84 ntBASIC3.57□□□□□ -1.84
SMAD9O15198 AP003399.1-201ENST00000637534 361 ntBASIC3.57□□□□□ -1.84
SMAD9O15198 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SMAD9O15198 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SMAD9O15198 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.57□□□□□ -1.84
SMAD9O15198 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
SMAD9O15198 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SMAD9O15198 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.57□□□□□ -1.84
SMAD9O15198 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
SMAD9O15198 AC091152.2-201ENST00000591628 2569 ntBASIC3.57□□□□□ -1.84
SMAD9O15198 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMAD9O15198 AL645937.1-201ENST00000641739 1652 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
SMAD9O15198 MTND4P4-201ENST00000439033 1366 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMAD9O15198 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
SMAD9O15198 RNY4P24-201ENST00000362735 96 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 RNA5SP399-201ENST00000364003 117 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 RNU6-1078P-201ENST00000364522 103 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMAD9O15198 MIR135A2-201ENST00000384854 100 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 AL138878.1-201ENST00000405131 347 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 MIR1251-201ENST00000408552 70 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 SNORA3C-201ENST00000408792 125 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMAD9O15198 AC007390.1-201ENST00000415722 356 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.56□□□□□ -1.84
SMAD9O15198 CCDC58P2-201ENST00000417131 366 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 OR4K11P-201ENST00000431829 904 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.56□□□□□ -1.84
SMAD9O15198 MTND4P32-201ENST00000437189 1237 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 SKP1P1-201ENST00000438081 489 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 AL121871.1-201ENST00000443413 436 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 COX6CP2-201ENST00000444980 225 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 AC010655.1-201ENST00000449336 292 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 AC073387.1-201ENST00000453261 709 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 AC098824.1-201ENST00000453565 980 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 AP1S2P1-201ENST00000457344 379 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.56□□□□□ -1.84
SMAD9O15198 AC069499.1-201ENST00000489433 509 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.56□□□□□ -1.84
SMAD9O15198 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.56□□□□□ -1.84
SMAD9O15198 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.56□□□□□ -1.84
SMAD9O15198 AC091965.2-201ENST00000512324 613 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.56□□□□□ -1.84
SMAD9O15198 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.56□□□□□ -1.84
SMAD9O15198 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.56□□□□□ -1.84
SMAD9O15198 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.56□□□□□ -1.84
SMAD9O15198 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.56□□□□□ -1.84
SMAD9O15198 MIR4286-201ENST00000580651 93 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 AC060771.1-201ENST00000582031 164 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 MIR548AB-201ENST00000584917 84 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 AC012065.4-201ENST00000602445 679 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 AC245389.1-201ENST00000605141 529 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 AC080013.6-201ENST00000606185 215 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 AL158211.4-201ENST00000606988 584 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 AC135507.1-201ENST00000607214 561 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.56□□□□□ -1.84
SMAD9O15198 AL158063.1-201ENST00000615349 536 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 MIR6500-201ENST00000622700 86 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.56□□□□□ -1.84
SMAD9O15198 AC025048.6-202ENST00000627667 438 ntBASIC3.56□□□□□ -1.84
SMAD9O15198 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMAD9O15198 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
SMAD9O15198 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
SMAD9O15198 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
SMAD9O15198 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.55□□□□□ -1.84
SMAD9O15198 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SMAD9O15198 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SMAD9O15198 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
SMAD9O15198 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SMAD9O15198 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SMAD9O15198 Y_RNA.77-201ENST00000362962 107 ntBASIC3.55□□□□□ -1.84
SMAD9O15198 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.55□□□□□ -1.84
SMAD9O15198 RNU5E-5P-201ENST00000365379 116 ntBASIC3.55□□□□□ -1.84
SMAD9O15198 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SMAD9O15198 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SMAD9O15198 RNU6-533P-201ENST00000384144 107 ntBASIC3.55□□□□□ -1.84
SMAD9O15198 MIR670-201ENST00000390142 98 ntBASIC3.55□□□□□ -1.84
SMAD9O15198 AP000567.1-201ENST00000406413 156 ntBASIC3.55□□□□□ -1.84
SMAD9O15198 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.55□□□□□ -1.84
SMAD9O15198 SSXP9-201ENST00000417503 292 ntBASIC3.55□□□□□ -1.84
SMAD9O15198 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.55□□□□□ -1.84
SMAD9O15198 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.55□□□□□ -1.84
SMAD9O15198 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SMAD9O15198 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.55□□□□□ -1.84
SMAD9O15198 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.55□□□□□ -1.84
SMAD9O15198 SNRPGP9-201ENST00000456025 225 ntBASIC3.55□□□□□ -1.84
SMAD9O15198 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms