Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.39□□□□□ -1.55
SOX1O00570 SCARNA18-201ENST00000459004 134 ntBASIC5.39□□□□□ -1.55
SOX1O00570 AC116533.1-201ENST00000459748 321 ntBASIC5.39□□□□□ -1.55
SOX1O00570 AC010655.3-201ENST00000478818 450 ntBASIC5.39□□□□□ -1.55
SOX1O00570 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.39□□□□□ -1.55
SOX1O00570 RPL30P11-201ENST00000495304 339 ntBASIC5.39□□□□□ -1.55
SOX1O00570 AC026801.2-201ENST00000515352 425 ntBASIC5.39□□□□□ -1.55
SOX1O00570 AC009812.2-201ENST00000517657 457 ntBASIC5.39□□□□□ -1.55
SOX1O00570 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.39□□□□□ -1.55
SOX1O00570 AL133271.1-201ENST00000538229 291 ntBASIC5.39□□□□□ -1.55
SOX1O00570 AL358913.1-201ENST00000554342 121 ntBASIC5.39□□□□□ -1.55
SOX1O00570 AC025884.1-201ENST00000556034 378 ntBASIC5.39□□□□□ -1.55
SOX1O00570 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC5.39□□□□□ -1.55
SOX1O00570 BNIP3P16-201ENST00000589779 534 ntBASIC5.39□□□□□ -1.55
SOX1O00570 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.39□□□□□ -1.55
SOX1O00570 PISRT1.1-201ENST00000616930 107 ntBASIC5.39□□□□□ -1.55
SOX1O00570 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.39□□□□□ -1.55
SOX1O00570 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SOX1O00570 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.39□□□□□ -1.55
SOX1O00570 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
SOX1O00570 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SOX1O00570 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
SOX1O00570 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.39□□□□□ -1.55
SOX1O00570 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SOX1O00570 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
SOX1O00570 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SOX1O00570 PROS2P-201ENST00000474651 1951 ntBASIC5.38□□□□□ -1.55
SOX1O00570 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SOX1O00570 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SOX1O00570 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SOX1O00570 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SOX1O00570 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SOX1O00570 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.38□□□□□ -1.55
SOX1O00570 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
SOX1O00570 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.38□□□□□ -1.55
SOX1O00570 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.38□□□□□ -1.55
SOX1O00570 Y_RNA.80-201ENST00000362996 102 ntBASIC5.38□□□□□ -1.55
SOX1O00570 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.38□□□□□ -1.55
SOX1O00570 GNG5P2-201ENST00000372054 207 ntBASIC5.38□□□□□ -1.55
SOX1O00570 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SOX1O00570 RNU6-890P-201ENST00000384121 107 ntBASIC5.38□□□□□ -1.55
SOX1O00570 RNY1P14-201ENST00000384426 108 ntBASIC5.38□□□□□ -1.55
SOX1O00570 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.38□□□□□ -1.55
SOX1O00570 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.38□□□□□ -1.55
SOX1O00570 AC093151.1-201ENST00000427711 313 ntBASIC5.38□□□□□ -1.55
SOX1O00570 AL591212.2-201ENST00000433923 257 ntBASIC5.38□□□□□ -1.55
SOX1O00570 AC127537.2-201ENST00000439258 465 ntBASIC5.38□□□□□ -1.55
SOX1O00570 PRSS3P4-201ENST00000453323 162 ntBASIC5.38□□□□□ -1.55
SOX1O00570 RPL36AP13-201ENST00000457490 317 ntBASIC5.38□□□□□ -1.55
SOX1O00570 RPL5P30-201ENST00000465511 891 ntBASIC5.38□□□□□ -1.55
SOX1O00570 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.38□□□□□ -1.55
SOX1O00570 AF213884.1-201ENST00000488102 463 ntBASIC5.38□□□□□ -1.55
SOX1O00570 TRBV5-2-201ENST00000489095 273 ntBASIC5.38□□□□□ -1.55
SOX1O00570 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.38□□□□□ -1.55
SOX1O00570 HMGB1P21-201ENST00000502313 581 ntBASIC5.38□□□□□ -1.55
SOX1O00570 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.38□□□□□ -1.55
SOX1O00570 Y_RNA.661-201ENST00000516003 99 ntBASIC5.38□□□□□ -1.55
SOX1O00570 RNU6-1016P-201ENST00000516689 94 ntBASIC5.38□□□□□ -1.55
SOX1O00570 RNU6-64P-201ENST00000517119 105 ntBASIC5.38□□□□□ -1.55
SOX1O00570 AP005902.1-201ENST00000521358 186 ntBASIC5.38□□□□□ -1.55
SOX1O00570 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.38□□□□□ -1.55
SOX1O00570 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.38□□□□□ -1.55
SOX1O00570 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.38□□□□□ -1.55
SOX1O00570 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.38□□□□□ -1.55
SOX1O00570 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.38□□□□□ -1.55
SOX1O00570 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.38□□□□□ -1.55
SOX1O00570 AC012443.1-201ENST00000605605 231 ntBASIC5.38□□□□□ -1.55
SOX1O00570 AP005432.2-201ENST00000608162 586 ntBASIC5.38□□□□□ -1.55
SOX1O00570 AC011890.2-201ENST00000613393 294 ntBASIC5.38□□□□□ -1.55
SOX1O00570 AC004696.1-201ENST00000614345 607 ntBASIC5.38□□□□□ -1.55
SOX1O00570 AC114781.5-201ENST00000615297 108 ntBASIC5.38□□□□□ -1.55
SOX1O00570 AL355365.1-201ENST00000616480 294 ntBASIC5.38□□□□□ -1.55
SOX1O00570 AL445363.3-201ENST00000623080 671 ntBASIC5.38□□□□□ -1.55
SOX1O00570 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SOX1O00570 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.38□□□□□ -1.55
SOX1O00570 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SOX1O00570 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SOX1O00570 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SOX1O00570 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SOX1O00570 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SOX1O00570 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SOX1O00570 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SOX1O00570 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.38□□□□□ -1.55
SOX1O00570 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SOX1O00570 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SOX1O00570 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SOX1O00570 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SOX1O00570 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SOX1O00570 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SOX1O00570 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
SOX1O00570 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SOX1O00570 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SOX1O00570 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SOX1O00570 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SOX1O00570 AL606537.1-201ENST00000607258 2011 ntBASIC5.37□□□□□ -1.55
SOX1O00570 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SOX1O00570 RNU6-188P-201ENST00000364207 107 ntBASIC5.37□□□□□ -1.55
SOX1O00570 SNORA63.7-201ENST00000365579 123 ntBASIC5.37□□□□□ -1.55
SOX1O00570 Y_RNA.455-201ENST00000384230 98 ntBASIC5.37□□□□□ -1.55
SOX1O00570 MIR554-201ENST00000384874 96 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms