Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PDLIM1O00151 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.16□□□□□ -1.9
PDLIM1O00151 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.16□□□□□ -1.9
PDLIM1O00151 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.16□□□□□ -1.9
PDLIM1O00151 USP9YP34-201ENST00000453983 808 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 BTF3P5-201ENST00000457252 467 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 USP9YP25-201ENST00000457708 443 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 AC026410.2-201ENST00000460281 156 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 RPS15AP17-201ENST00000470598 390 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 AP001025.2-201ENST00000490908 477 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PDLIM1O00151 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.16□□□□□ -1.9
PDLIM1O00151 KLHL2P1-201ENST00000508691 521 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 AC109445.1-201ENST00000512356 383 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.16□□□□□ -1.9
PDLIM1O00151 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PDLIM1O00151 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.16□□□□□ -1.9
PDLIM1O00151 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.16□□□□□ -1.9
PDLIM1O00151 EEF1B2P4-201ENST00000551398 348 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 AC126177.3-201ENST00000551839 688 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.16□□□□□ -1.9
PDLIM1O00151 OR4K7P-201ENST00000580232 945 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.16□□□□□ -1.9
PDLIM1O00151 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.16□□□□□ -1.9
PDLIM1O00151 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.16□□□□□ -1.9
PDLIM1O00151 AC004987.4-201ENST00000603383 338 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 AC010591.1-201ENST00000603941 649 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 AC105148.1-201ENST00000604961 409 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 AC069304.2-201ENST00000605154 435 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 AC055876.5-201ENST00000605667 259 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 AC013470.4-201ENST00000619978 986 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.16□□□□□ -1.9
PDLIM1O00151 AP001002.2-201ENST00000625137 386 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PDLIM1O00151 AP002907.1-201ENST00000606361 1430 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 AC244517.1-201ENST00000606030 2086 ntBASIC3.16□□□□□ -1.9
PDLIM1O00151 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.16□□□□□ -1.9
PDLIM1O00151 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.15□□□□□ -1.9
PDLIM1O00151 AL049781.1-201ENST00000623195 3585 ntBASIC3.15□□□□□ -1.9
PDLIM1O00151 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.15□□□□□ -1.9
PDLIM1O00151 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.15□□□□□ -1.91
PDLIM1O00151 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
PDLIM1O00151 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PDLIM1O00151 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.15□□□□□ -1.91
PDLIM1O00151 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.15□□□□□ -1.91
PDLIM1O00151 RNU6-712P-201ENST00000410558 100 ntBASIC3.15□□□□□ -1.91
PDLIM1O00151 AC092447.6-201ENST00000414578 210 ntBASIC3.15□□□□□ -1.91
PDLIM1O00151 RPL32P35-201ENST00000415214 394 ntBASIC3.15□□□□□ -1.91
PDLIM1O00151 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.15□□□□□ -1.91
PDLIM1O00151 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.15□□□□□ -1.91
PDLIM1O00151 USP9YP11-201ENST00000427537 717 ntBASIC3.15□□□□□ -1.91
PDLIM1O00151 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.15□□□□□ -1.91
PDLIM1O00151 HSPD1P21-201ENST00000436541 245 ntBASIC3.15□□□□□ -1.91
PDLIM1O00151 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.15□□□□□ -1.91
PDLIM1O00151 RBMY2UP-201ENST00000453474 324 ntBASIC3.15□□□□□ -1.91
PDLIM1O00151 MTCO3P11-201ENST00000455103 774 ntBASIC3.15□□□□□ -1.91
PDLIM1O00151 HMGN2P13-201ENST00000476476 274 ntBASIC3.15□□□□□ -1.91
PDLIM1O00151 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.15□□□□□ -1.91
PDLIM1O00151 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.15□□□□□ -1.91
PDLIM1O00151 WBP1LP4-201ENST00000505043 344 ntBASIC3.15□□□□□ -1.91
PDLIM1O00151 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PDLIM1O00151 XKRY-201ENST00000510392 1100 ntBASIC3.15□□□□□ -1.91
PDLIM1O00151 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.15□□□□□ -1.91
PDLIM1O00151 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.15□□□□□ -1.91
PDLIM1O00151 AC024224.1-201ENST00000538284 609 ntBASIC3.15□□□□□ -1.91
PDLIM1O00151 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PDLIM1O00151 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.15□□□□□ -1.91
PDLIM1O00151 CCNG2P1-201ENST00000549521 1000 ntBASIC3.15□□□□□ -1.91
PDLIM1O00151 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.15□□□□□ -1.91
PDLIM1O00151 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.15□□□□□ -1.91
PDLIM1O00151 HSPE1P3-201ENST00000559254 309 ntBASIC3.15□□□□□ -1.91
PDLIM1O00151 AC090695.1-201ENST00000561269 1222 ntBASIC3.15□□□□□ -1.91
PDLIM1O00151 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.15□□□□□ -1.91
PDLIM1O00151 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.15□□□□□ -1.91
PDLIM1O00151 AL512347.1-201ENST00000566420 503 ntBASIC3.15□□□□□ -1.91
PDLIM1O00151 AC022662.1-201ENST00000580252 331 ntBASIC3.15□□□□□ -1.91
PDLIM1O00151 CCDC58P3-201ENST00000590792 430 ntBASIC3.15□□□□□ -1.91
PDLIM1O00151 AC245036.5-201ENST00000596330 847 ntBASIC3.15□□□□□ -1.91
PDLIM1O00151 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.15□□□□□ -1.91
PDLIM1O00151 RPL23AP88-201ENST00000605759 454 ntBASIC3.15□□□□□ -1.91
PDLIM1O00151 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.15□□□□□ -1.91
PDLIM1O00151 AL390240.1-201ENST00000612950 384 ntBASIC3.15□□□□□ -1.91
PDLIM1O00151 AC231657.1-201ENST00000624313 397 ntBASIC3.15□□□□□ -1.91
PDLIM1O00151 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.15□□□□□ -1.91
PDLIM1O00151 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
PDLIM1O00151 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PDLIM1O00151 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
PDLIM1O00151 OR5BR1P-201ENST00000524992 1330 ntBASIC3.15□□□□□ -1.91
PDLIM1O00151 AC017071.1-201ENST00000564407 2204 ntBASIC3.15□□□□□ -1.91
PDLIM1O00151 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.15□□□□□ -1.91
PDLIM1O00151 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
PDLIM1O00151 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PDLIM1O00151 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PDLIM1O00151 RNU1-70P-201ENST00000362618 164 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 RNA5SP119-201ENST00000362715 117 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 Y_RNA.311-201ENST00000365068 96 ntBASIC3.14□□□□□ -1.91
PDLIM1O00151 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PDLIM1O00151 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.14□□□□□ -1.91
PDLIM1O00151 RNA5SP44-201ENST00000410446 133 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms