Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC188H7C350 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC188H7C350 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC188H7C350 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC188H7C350 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.51□□□□□ -1.85
CCDC188H7C350 AL391156.1-201ENST00000554965 554 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC188H7C350 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC188H7C350 AC106785.1-201ENST00000565935 262 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC188H7C350 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.51□□□□□ -1.85
CCDC188H7C350 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC188H7C350 COX6CP3-201ENST00000580869 223 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 AC013444.2-201ENST00000603317 787 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 RNU6-88P-201ENST00000606801 100 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 U1.23-201ENST00000610293 146 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 VIS1.1-201ENST00000610517 203 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 RNU1-68P-201ENST00000615382 146 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 U1.39-201ENST00000621562 146 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC188H7C350 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC188H7C350 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
CCDC188H7C350 AP001148.1-201ENST00000624124 2359 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC188H7C350 OR5H2-201ENST00000355273 945 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CCDC188H7C350 RNA5SP295-201ENST00000362655 121 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 RNU6-1207P-201ENST00000384343 107 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 MIR135A2-201ENST00000384854 100 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 EI24P2-201ENST00000397776 1076 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC188H7C350 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
CCDC188H7C350 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC188H7C350 XKRYP1-201ENST00000423438 492 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC188H7C350 MTCO1P39-201ENST00000426148 480 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC188H7C350 ARF4P2-201ENST00000430209 526 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 EZH2P1-201ENST00000431167 291 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC188H7C350 XKRYP2-201ENST00000432915 492 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 NEK4P1-201ENST00000433383 879 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 AC024082.2-201ENST00000434771 238 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC188H7C350 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC188H7C350 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC188H7C350 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC188H7C350 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC188H7C350 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC188H7C350 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC188H7C350 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.5□□□□□ -1.85
CCDC188H7C350 RN7SL132P-201ENST00000478131 296 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 AC108860.1-201ENST00000484521 383 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 CBX3P3-201ENST00000508108 532 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 RNU6-714P-201ENST00000516963 103 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.5□□□□□ -1.85
CCDC188H7C350 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.5□□□□□ -1.85
CCDC188H7C350 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC188H7C350 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CCDC188H7C350 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC188H7C350 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC188H7C350 RN7SL703P-201ENST00000578485 302 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC188H7C350 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC188H7C350 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC188H7C350 AC106900.2-201ENST00000604994 317 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 AL133507.1-201ENST00000605269 557 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 AC013244.3-201ENST00000605614 388 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 AC090186.1-201ENST00000605991 572 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 AP002826.1-201ENST00000608835 315 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 MIR7851-201ENST00000610611 160 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CCDC188H7C350 AC008443.7-201ENST00000622195 246 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC188H7C350 RNA5SP196-201ENST00000625967 102 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC188H7C350 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.5□□□□□ -1.85
CCDC188H7C350 MTND4P34-201ENST00000572715 1371 ntBASIC3.5□□□□□ -1.85
CCDC188H7C350 CR383658.2-201ENST00000547576 1525 ntBASIC3.49□□□□□ -1.85
CCDC188H7C350 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC188H7C350 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.49□□□□□ -1.85
CCDC188H7C350 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC188H7C350 RNU6-343P-201ENST00000364709 104 ntBASIC3.49□□□□□ -1.85
CCDC188H7C350 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
CCDC188H7C350 AL359837.1-201ENST00000381357 287 ntBASIC3.49□□□□□ -1.85
CCDC188H7C350 MIR134-201ENST00000385258 73 ntBASIC3.49□□□□□ -1.85
CCDC188H7C350 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CCDC188H7C350 AC007899.1-201ENST00000412776 775 ntBASIC3.49□□□□□ -1.85
CCDC188H7C350 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.49□□□□□ -1.85
CCDC188H7C350 RPL32P35-201ENST00000415214 394 ntBASIC3.49□□□□□ -1.85
CCDC188H7C350 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC188H7C350 AL022400.1-201ENST00000423946 935 ntBASIC3.49□□□□□ -1.85
CCDC188H7C350 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC188H7C350 CST9LP2-201ENST00000437612 320 ntBASIC3.49□□□□□ -1.85
CCDC188H7C350 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC188H7C350 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC188H7C350 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC188H7C350 AL592447.1-201ENST00000447592 540 ntBASIC3.49□□□□□ -1.85
CCDC188H7C350 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.49□□□□□ -1.85
CCDC188H7C350 AC091564.1-201ENST00000464563 479 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms