Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 TGIF1P1-201ENST00000558095 802 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 MIR4637-201ENST00000582405 84 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 BNIP3P24-201ENST00000593398 557 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 AC138932.5-201ENST00000617759 563 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 NUP58P1-201ENST00000502546 1738 ntBASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NEDD8-MDP1E9PL57 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 MTND4P13-201ENST00000402078 1023 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 AL583834.1-201ENST00000406943 343 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 RNU6-757P-201ENST00000410334 100 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 CST9LP2-201ENST00000437612 320 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 AC026410.2-201ENST00000460281 156 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 AC087312.1-201ENST00000471411 480 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 RPL7P18-201ENST00000478965 734 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 RPL5P23-201ENST00000496040 868 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 TMEM251P1-201ENST00000503717 318 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 AC034244.1-201ENST00000507687 207 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 AC010587.2-201ENST00000511727 448 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 RNU2-58P-201ENST00000516403 183 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 MIR2276-201ENST00000516886 89 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 Y_RNA.717-201ENST00000517106 92 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 IGHV3-76-201ENST00000522465 295 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 OR5AK1P-201ENST00000524837 922 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 AC023538.1-201ENST00000534576 736 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 DUXAP1-201ENST00000556632 463 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 AC087465.1-201ENST00000560574 245 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 AC006270.2-201ENST00000578523 652 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 AC009220.3-201ENST00000604318 586 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 AC135507.2-201ENST00000612443 309 ntBASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NEDD8-MDP1E9PL57 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
NEDD8-MDP1E9PL57 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 AP002907.1-201ENST00000606361 1430 ntBASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 FAM133CP-201ENST00000332869 704 ntBASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 RNU6-1122P-201ENST00000384449 107 ntBASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 RPL23AP29-201ENST00000397284 453 ntBASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 AL138885.1-201ENST00000405921 675 ntBASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 RNU4-78P-201ENST00000410940 126 ntBASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 MTND3P1-201ENST00000441336 220 ntBASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 RSL24D1P3-201ENST00000449255 495 ntBASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 MTND1P16-201ENST00000465177 898 ntBASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 SYPL1P1-201ENST00000473622 768 ntBASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 AP003385.6-201ENST00000531603 374 ntBASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 AC090616.5-202ENST00000582111 297 ntBASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 UBL5P2-201ENST00000583788 219 ntBASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 AL451007.1-201ENST00000595491 289 ntBASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 AC006539.2-201ENST00000601729 572 ntBASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 AC103881.1-201ENST00000603476 538 ntBASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 IGHV3-29-201ENST00000604817 344 ntBASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 AL158042.1-201ENST00000605338 460 ntBASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 AC099778.2-201ENST00000610904 211 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms