Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 MIR3186-201ENST00000577404 85 ntBASIC1.56□□□□□ -2.16
COL6A5A8TX70 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC1.56□□□□□ -2.16
COL6A5A8TX70 AL136164.4-201ENST00000625013 2135 ntBASIC1.56□□□□□ -2.16
COL6A5A8TX70 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.56□□□□□ -2.16
COL6A5A8TX70 MIR6715B-201ENST00000637172 77 ntBASIC1.56□□□□□ -2.16
COL6A5A8TX70 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
COL6A5A8TX70 MAPK10-266ENST00000641066 6555 ntBASIC1.56□□□□□ -2.16
COL6A5A8TX70 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.56□□□□□ -2.16
COL6A5A8TX70 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
COL6A5A8TX70 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.56□□□□□ -2.16
COL6A5A8TX70 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.56□□□□□ -2.16
COL6A5A8TX70 MIR365B-201ENST00000362317 111 ntBASIC1.55□□□□□ -2.16
COL6A5A8TX70 RNA5SP129-201ENST00000410276 118 ntBASIC1.55□□□□□ -2.16
COL6A5A8TX70 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC1.55□□□□□ -2.16
COL6A5A8TX70 AL590762.3-201ENST00000436372 640 ntBASIC1.55□□□□□ -2.16
COL6A5A8TX70 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC1.55□□□□□ -2.16
COL6A5A8TX70 IGLVIV-66-1-201ENST00000521832 460 ntBASIC1.55□□□□□ -2.16
COL6A5A8TX70 MIR4723-201ENST00000585070 81 ntBASIC1.55□□□□□ -2.16
COL6A5A8TX70 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC1.55□□□□□ -2.16
COL6A5A8TX70 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.55□□□□□ -2.16
COL6A5A8TX70 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.55□□□□□ -2.16
COL6A5A8TX70 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
COL6A5A8TX70 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
COL6A5A8TX70 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.55□□□□□ -2.16
COL6A5A8TX70 AL357520.1-201ENST00000441557 453 ntBASIC1.55□□□□□ -2.16
COL6A5A8TX70 KATNBL1P3-201ENST00000443475 909 ntBASIC1.55□□□□□ -2.16
COL6A5A8TX70 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.55□□□□□ -2.16
COL6A5A8TX70 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.55□□□□□ -2.16
COL6A5A8TX70 RPL23AP62-201ENST00000463396 453 ntBASIC1.55□□□□□ -2.16
COL6A5A8TX70 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.55□□□□□ -2.16
COL6A5A8TX70 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.55□□□□□ -2.16
COL6A5A8TX70 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.55□□□□□ -2.16
COL6A5A8TX70 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.55□□□□□ -2.16
COL6A5A8TX70 AC087854.1-201ENST00000519706 414 ntBASIC1.55□□□□□ -2.16
COL6A5A8TX70 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.55□□□□□ -2.16
COL6A5A8TX70 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.55□□□□□ -2.16
COL6A5A8TX70 Y_RNA.783-201ENST00000613546 102 ntBASIC1.55□□□□□ -2.16
COL6A5A8TX70 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.55□□□□□ -2.16
COL6A5A8TX70 AC084768.2-201ENST00000622736 221 ntBASIC1.55□□□□□ -2.16
COL6A5A8TX70 MTND4P35-201ENST00000604257 1375 ntBASIC1.55□□□□□ -2.16
COL6A5A8TX70 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
COL6A5A8TX70 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.55□□□□□ -2.16
COL6A5A8TX70 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
COL6A5A8TX70 RNU6-1027P-201ENST00000383998 107 ntBASIC1.54□□□□□ -2.16
COL6A5A8TX70 MIR142-201ENST00000384835 87 ntBASIC1.54□□□□□ -2.16
COL6A5A8TX70 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
COL6A5A8TX70 AL354719.1-201ENST00000406535 843 ntBASIC1.54□□□□□ -2.16
COL6A5A8TX70 RNA5SP239-201ENST00000410218 129 ntBASIC1.54□□□□□ -2.16
COL6A5A8TX70 AC012498.1-201ENST00000424037 437 ntBASIC1.54□□□□□ -2.16
COL6A5A8TX70 AC114786.4-201ENST00000508771 728 ntBASIC1.54□□□□□ -2.16
COL6A5A8TX70 AC119751.1-201ENST00000513357 765 ntBASIC1.54□□□□□ -2.16
COL6A5A8TX70 AC114797.1-201ENST00000514003 728 ntBASIC1.54□□□□□ -2.16
COL6A5A8TX70 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC1.54□□□□□ -2.16
COL6A5A8TX70 AC036111.3-201ENST00000526389 112 ntBASIC1.54□□□□□ -2.16
COL6A5A8TX70 AP000889.2-201ENST00000532684 490 ntBASIC1.54□□□□□ -2.16
COL6A5A8TX70 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.54□□□□□ -2.16
COL6A5A8TX70 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.54□□□□□ -2.16
COL6A5A8TX70 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.54□□□□□ -2.16
COL6A5A8TX70 AC008687.2-201ENST00000597865 520 ntBASIC1.54□□□□□ -2.16
COL6A5A8TX70 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.54□□□□□ -2.16
COL6A5A8TX70 AC067852.7-201ENST00000623270 535 ntBASIC1.54□□□□□ -2.16
COL6A5A8TX70 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
COL6A5A8TX70 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
COL6A5A8TX70 Y_RNA.48-201ENST00000362710 103 ntBASIC1.54□□□□□ -2.16
COL6A5A8TX70 RNA5SP257-201ENST00000363023 116 ntBASIC1.54□□□□□ -2.16
COL6A5A8TX70 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
COL6A5A8TX70 AL513175.2-201ENST00000422071 443 ntBASIC1.54□□□□□ -2.16
COL6A5A8TX70 RPL23AP74-201ENST00000437246 471 ntBASIC1.54□□□□□ -2.16
COL6A5A8TX70 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.54□□□□□ -2.16
COL6A5A8TX70 MTAPP1-201ENST00000489154 819 ntBASIC1.54□□□□□ -2.16
COL6A5A8TX70 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC1.54□□□□□ -2.16
COL6A5A8TX70 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.54□□□□□ -2.16
COL6A5A8TX70 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.54□□□□□ -2.16
COL6A5A8TX70 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.54□□□□□ -2.16
COL6A5A8TX70 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.54□□□□□ -2.16
COL6A5A8TX70 AP003499.2-201ENST00000624100 483 ntBASIC1.54□□□□□ -2.16
COL6A5A8TX70 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC1.54□□□□□ -2.16
COL6A5A8TX70 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
COL6A5A8TX70 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.54□□□□□ -2.16
COL6A5A8TX70 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
COL6A5A8TX70 AL445183.3-201ENST00000414168 502 ntBASIC1.53□□□□□ -2.16
COL6A5A8TX70 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.53□□□□□ -2.16
COL6A5A8TX70 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC1.53□□□□□ -2.16
COL6A5A8TX70 RNU6-250P-201ENST00000516958 103 ntBASIC1.53□□□□□ -2.16
COL6A5A8TX70 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.53□□□□□ -2.16
COL6A5A8TX70 PDCD5P1-201ENST00000543528 309 ntBASIC1.53□□□□□ -2.16
COL6A5A8TX70 AC122134.1-201ENST00000565664 1104 ntBASIC1.53□□□□□ -2.16
COL6A5A8TX70 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.53□□□□□ -2.16
COL6A5A8TX70 BX664608.1-201ENST00000610519 487 ntBASIC1.53□□□□□ -2.16
COL6A5A8TX70 MIR8081-201ENST00000611533 95 ntBASIC1.53□□□□□ -2.16
COL6A5A8TX70 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
COL6A5A8TX70 AC010733.2-201ENST00000589496 5702 ntBASIC1.53□□□□□ -2.16
COL6A5A8TX70 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.53□□□□□ -2.16
COL6A5A8TX70 AC025263.3-201ENST00000622965 1396 ntBASIC1.53□□□□□ -2.16
COL6A5A8TX70 RNU4-41P-201ENST00000364426 143 ntBASIC1.53□□□□□ -2.16
COL6A5A8TX70 MIR548J-201ENST00000408833 112 ntBASIC1.53□□□□□ -2.16
COL6A5A8TX70 NDUFB4P5-201ENST00000415445 361 ntBASIC1.53□□□□□ -2.16
COL6A5A8TX70 AC027124.2-201ENST00000428249 105 ntBASIC1.53□□□□□ -2.16
COL6A5A8TX70 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.53□□□□□ -2.16
COL6A5A8TX70 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms