Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 RNU4-21P-201ENST00000362802 126 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 RNU5F-6P-201ENST00000362979 116 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 SNORA70.2-201ENST00000364506 135 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.82□□□□□ -1.8
LRRC53A6NM62 AP002088.1-201ENST00000382740 395 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
LRRC53A6NM62 RN7SKP53-201ENST00000411337 315 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.82□□□□□ -1.8
LRRC53A6NM62 RPS7P15-201ENST00000415804 584 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 RAD23BP2-201ENST00000416003 1207 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 AC017079.2-201ENST00000416102 485 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 AL365338.1-201ENST00000422282 858 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 AL389915.1-201ENST00000422463 466 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 RPL37P21-201ENST00000435890 276 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 AC129850.1-201ENST00000436203 508 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.82□□□□□ -1.8
LRRC53A6NM62 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.82□□□□□ -1.8
LRRC53A6NM62 CDC27P1-201ENST00000445384 715 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.82□□□□□ -1.8
LRRC53A6NM62 AC073387.1-201ENST00000453261 709 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.82□□□□□ -1.8
LRRC53A6NM62 RN7SL594P-201ENST00000470590 287 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 NIPA2P2-201ENST00000496376 1083 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 AC078918.1-201ENST00000498515 228 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.82□□□□□ -1.8
LRRC53A6NM62 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.82□□□□□ -1.8
LRRC53A6NM62 RN7SKP60-201ENST00000516985 239 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 SNORA31.20-201ENST00000517111 133 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.82□□□□□ -1.8
LRRC53A6NM62 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
LRRC53A6NM62 HIGD1AP10-201ENST00000527837 282 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 AP003497.1-201ENST00000528472 562 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 HSPE1P5-201ENST00000561489 272 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.82□□□□□ -1.8
LRRC53A6NM62 AC022916.3-201ENST00000592961 742 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 AL031176.1-201ENST00000604554 466 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 AC092653.1-201ENST00000608509 531 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 AC073114.1-201ENST00000612027 490 ntBASIC3.82□□□□□ -1.8
LRRC53A6NM62 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.82□□□□□ -1.8
LRRC53A6NM62 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.82□□□□□ -1.8
LRRC53A6NM62 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
LRRC53A6NM62 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC53A6NM62 TNPO1P3-201ENST00000436471 2662 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 AC007823.1-201ENST00000569932 1566 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC53A6NM62 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.81□□□□□ -1.8
LRRC53A6NM62 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC53A6NM62 RNU6-359P-201ENST00000365466 108 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 U8.11-201ENST00000384699 133 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 U8.12-201ENST00000384701 133 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
LRRC53A6NM62 RN7SKP285-201ENST00000410137 318 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 EI24P1-201ENST00000416584 867 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC53A6NM62 AC244035.1-201ENST00000430042 390 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC53A6NM62 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC53A6NM62 FAM103A2P-201ENST00000444122 354 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 RPL7P36-201ENST00000444633 681 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 BMI1P1-201ENST00000445879 941 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 RPS3AP46-201ENST00000448352 682 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 TPT1P12-201ENST00000448968 492 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 AC104308.1-201ENST00000454621 333 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 AC007967.1-201ENST00000455422 1159 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 U8.18-201ENST00000459285 133 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC53A6NM62 AC034222.1-201ENST00000494052 532 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 AC080014.1-201ENST00000496877 1201 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 AC020893.1-201ENST00000502452 580 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRC53A6NM62 AC105313.1-201ENST00000509121 353 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 AC110768.1-201ENST00000509222 400 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.81□□□□□ -1.8
LRRC53A6NM62 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC53A6NM62 AC116347.2-201ENST00000514912 523 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 SNORA70.18-201ENST00000516696 98 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 RANP9-201ENST00000519957 271 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.81□□□□□ -1.8
LRRC53A6NM62 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRC53A6NM62 AC011602.1-201ENST00000546484 331 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC53A6NM62 AC007224.1-201ENST00000564410 144 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC53A6NM62 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC53A6NM62 OR4K8P-201ENST00000578842 1048 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 MIR5685-201ENST00000579080 79 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.81□□□□□ -1.8
LRRC53A6NM62 Z69908.1-201ENST00000622603 247 ntBASIC3.81□□□□□ -1.8
LRRC53A6NM62 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC53A6NM62 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
LRRC53A6NM62 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC53A6NM62 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC53A6NM62 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRC53A6NM62 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.8□□□□□ -1.8
LRRC53A6NM62 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LRRC53A6NM62 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRC53A6NM62 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
LRRC53A6NM62 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LRRC53A6NM62 RNU5F-7P-201ENST00000363696 115 ntBASIC3.8□□□□□ -1.8
LRRC53A6NM62 RNA5SP189-201ENST00000364920 115 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms