Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 RNY4P16-201ENST00000364768 94 ntBASIC3.84□□□□□ -1.79
CGB1A6NKQ9 SNORA33.2-201ENST00000365413 134 ntBASIC3.84□□□□□ -1.79
CGB1A6NKQ9 RNU6-463P-201ENST00000384340 107 ntBASIC3.84□□□□□ -1.79
CGB1A6NKQ9 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.84□□□□□ -1.79
CGB1A6NKQ9 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.84□□□□□ -1.79
CGB1A6NKQ9 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.84□□□□□ -1.79
CGB1A6NKQ9 AL451054.2-201ENST00000420896 202 ntBASIC3.84□□□□□ -1.79
CGB1A6NKQ9 HSPE1P1-201ENST00000421494 318 ntBASIC3.84□□□□□ -1.79
CGB1A6NKQ9 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.84□□□□□ -1.79
CGB1A6NKQ9 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.84□□□□□ -1.79
CGB1A6NKQ9 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.84□□□□□ -1.79
CGB1A6NKQ9 TDGF1P1-201ENST00000445734 527 ntBASIC3.84□□□□□ -1.79
CGB1A6NKQ9 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.84□□□□□ -1.79
CGB1A6NKQ9 HMGB3P30-201ENST00000457863 606 ntBASIC3.84□□□□□ -1.79
CGB1A6NKQ9 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.84□□□□□ -1.79
CGB1A6NKQ9 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.84□□□□□ -1.79
CGB1A6NKQ9 RNA5SP337-201ENST00000517007 109 ntBASIC3.84□□□□□ -1.79
CGB1A6NKQ9 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.84□□□□□ -1.79
CGB1A6NKQ9 OR5BN1P-201ENST00000532955 829 ntBASIC3.84□□□□□ -1.79
CGB1A6NKQ9 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.84□□□□□ -1.79
CGB1A6NKQ9 AC093012.1-202ENST00000549403 582 ntBASIC3.84□□□□□ -1.79
CGB1A6NKQ9 FKBP1BP1-201ENST00000553366 325 ntBASIC3.84□□□□□ -1.79
CGB1A6NKQ9 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.84□□□□□ -1.79
CGB1A6NKQ9 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.84□□□□□ -1.79
CGB1A6NKQ9 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.84□□□□□ -1.79
CGB1A6NKQ9 SNORA74C-1-201ENST00000580726 201 ntBASIC3.84□□□□□ -1.79
CGB1A6NKQ9 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC3.84□□□□□ -1.79
CGB1A6NKQ9 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.84□□□□□ -1.79
CGB1A6NKQ9 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.84□□□□□ -1.79
CGB1A6NKQ9 SUMO2P15-201ENST00000604285 278 ntBASIC3.84□□□□□ -1.79
CGB1A6NKQ9 AP001330.4-201ENST00000604350 154 ntBASIC3.84□□□□□ -1.79
CGB1A6NKQ9 AC103710.3-201ENST00000608157 948 ntBASIC3.84□□□□□ -1.79
CGB1A6NKQ9 AL391813.2-201ENST00000609113 322 ntBASIC3.84□□□□□ -1.79
CGB1A6NKQ9 AL158196.1-201ENST00000616786 434 ntBASIC3.84□□□□□ -1.79
CGB1A6NKQ9 MIR6886-201ENST00000619864 61 ntBASIC3.84□□□□□ -1.79
CGB1A6NKQ9 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.84□□□□□ -1.79
CGB1A6NKQ9 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.84□□□□□ -1.79
CGB1A6NKQ9 AP001642.1-201ENST00000624727 2117 ntBASIC3.84□□□□□ -1.79
CGB1A6NKQ9 AL078596.1-201ENST00000624856 447 ntBASIC3.84□□□□□ -1.79
CGB1A6NKQ9 AL353662.3-201ENST00000625131 237 ntBASIC3.84□□□□□ -1.79
CGB1A6NKQ9 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.84□□□□□ -1.79
CGB1A6NKQ9 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
CGB1A6NKQ9 LARP1BP1-201ENST00000506036 1359 ntBASIC3.84□□□□□ -1.79
CGB1A6NKQ9 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CGB1A6NKQ9 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
CGB1A6NKQ9 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
CGB1A6NKQ9 AC139713.2-215ENST00000641428 5037 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 OR5P1P-201ENST00000299512 925 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 RNU1-83P-201ENST00000363426 164 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 RN7SKP44-201ENST00000363602 316 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 Y_RNA.459-201ENST00000384251 102 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 RNU6-1297P-201ENST00000384415 104 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 MIR323B-201ENST00000385269 82 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 SNORD37.1-201ENST00000390968 65 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 RPL5P18-201ENST00000406671 891 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 RNU6-193P-201ENST00000410977 107 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 AC018630.2-202ENST00000422992 927 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 FAR2P4-202ENST00000425399 584 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 FABP7P2-201ENST00000429946 379 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 ERLEC1P1-201ENST00000433806 578 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 USP9YP7-201ENST00000436723 430 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 AC004938.1-201ENST00000438468 308 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 MTND3P16-201ENST00000452205 344 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 USP9YP32-201ENST00000452432 430 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 AL445433.1-201ENST00000457507 257 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 AC006967.1-201ENST00000467608 589 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 GMFBP1-201ENST00000467831 427 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 AL163540.1-201ENST00000485382 386 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 RPL23AP72-201ENST00000492447 435 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 MTCO1P29-201ENST00000496868 288 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.83□□□□□ -1.8
CGB1A6NKQ9 AC105417.1-201ENST00000514691 285 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 RNU4-29P-201ENST00000515943 174 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 SCARNA24.1-201ENST00000516465 137 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 Y_RNA.711-201ENST00000516993 102 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 RN7SKP147-201ENST00000517154 244 ntBASIC3.83□□□□□ -1.8
CGB1A6NKQ9 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms