Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RPL23AP41-201ENST00000484754 458 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AC110792.1-201ENST00000491826 472 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AC026979.1-201ENST00000492525 396 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AC010460.1-201ENST00000507087 466 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 RNA5SP315-201ENST00000516340 116 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 RNA5SP312-201ENST00000517068 116 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 RNU6-430P-201ENST00000517078 107 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AC022616.6-201ENST00000520479 119 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AC022695.1-201ENST00000522089 237 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 OR4P1P-201ENST00000530808 1136 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 MIR3913-1-201ENST00000577744 102 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AP001094.1-201ENST00000579805 193 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 NRBF2P1-201ENST00000587407 859 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AC107304.1-201ENST00000604229 296 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AL161729.4-201ENST00000604650 476 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AL022154.1-201ENST00000604698 785 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AC098614.4-201ENST00000607601 462 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AL355472.4-201ENST00000610233 626 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 BX664608.1-201ENST00000610519 487 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 U73479.1-201ENST00000618062 168 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AC072046.2-201ENST00000618366 268 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AC012150.2-201ENST00000621300 544 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AC006065.5-201ENST00000623427 349 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AC079597.1-201ENST00000624306 508 ntBASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
TCRBV7S3A2A0A539 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 MIR372-201ENST00000362225 67 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 UBE2V1P10-201ENST00000414685 269 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 AL589872.1-201ENST00000426602 288 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 NDUFB1P1-201ENST00000435191 180 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 MTND1P4-201ENST00000435196 415 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 NANOGNBP1-201ENST00000448444 480 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 AC093899.1-201ENST00000457984 376 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 RPL21P11-201ENST00000461458 483 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 ST13P14-201ENST00000474095 734 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 TMED11P-201ENST00000479478 690 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 AL358832.1-201ENST00000497800 389 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 VWA8P1-201ENST00000510889 176 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 FTH1P21-201ENST00000512179 511 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 Y_RNA.672-201ENST00000516289 104 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 RN7SKP83-201ENST00000516512 178 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 SCARNA14-201ENST00000516903 136 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 AL121576.1-201ENST00000556055 276 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 AC112230.1-201ENST00000604342 547 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 IGHV3-29-201ENST00000604817 344 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 AL592436.1-201ENST00000605135 558 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 AC055876.5-201ENST00000605667 259 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 SNORA62.6-201ENST00000606322 83 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 AL590099.1-201ENST00000615276 138 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 MIR6500-201ENST00000622700 86 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 AC112484.5-201ENST00000624189 228 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 MIR6830-201ENST00000636015 70 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 AC010149.2-201ENST00000637608 315 ntBASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TCRBV7S3A2A0A539 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms