Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 RNU6-179P-201ENST00000363350 107 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 RNA5SP515-201ENST00000364570 118 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 RNU6-882P-201ENST00000391025 103 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 RPL7AP73-201ENST00000413490 353 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 EI24P1-201ENST00000416584 867 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 RPL21P111-201ENST00000418453 477 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 AC140479.3-201ENST00000418944 1126 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 AL645608.4-201ENST00000423619 154 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 RAC1P6-201ENST00000423911 575 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 AC090774.1-201ENST00000435925 246 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 CYCSP43-201ENST00000438233 310 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 AC098614.3-201ENST00000438957 440 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 MED28P3-201ENST00000444288 531 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 MTND1P18-201ENST00000448191 573 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 AL691482.1-201ENST00000453255 87 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 MLLT10P2-201ENST00000506434 249 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 AC108475.1-201ENST00000507880 950 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 RNU6-1092P-201ENST00000516955 87 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 AP004371.1-201ENST00000525240 214 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 AC018630.1-201ENST00000541376 925 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 AC068831.4-201ENST00000556118 109 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 RN7SL652P-201ENST00000577769 300 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 AC010928.3-201ENST00000587712 541 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 AP005019.3-201ENST00000620418 560 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 AC100810.6-201ENST00000638068 285 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 ZNF137P-201ENST00000456718 1920 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 AL731566.1-201ENST00000620490 1937 ntBASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AL022322.2-201ENST00000624072 20397 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 RPL7P26-201ENST00000333817 754 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AC067945.1-201ENST00000342609 618 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 RNU6-1284P-201ENST00000363701 100 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 SNORA70.6-201ENST00000383934 134 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 RNU6-701P-201ENST00000384059 107 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 SNORA5.1-201ENST00000384275 131 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 RPL12P9-201ENST00000412942 488 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AC068533.1-201ENST00000418542 415 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AL121601.2-201ENST00000438019 707 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 USP9YP8-201ENST00000441913 500 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AC133473.1-201ENST00000455173 299 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 MRPS17P3-201ENST00000465453 385 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 RN7SL558P-201ENST00000497468 299 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 EIF4EP3-201ENST00000498782 656 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 VN1R104P-201ENST00000505115 1009 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AC114781.4-201ENST00000513707 639 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AC105417.1-201ENST00000514691 285 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 RNA5SP503-201ENST00000517047 117 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AP004242.1-201ENST00000533701 349 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AC093012.1-202ENST00000549403 582 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AL049839.1-201ENST00000556151 657 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 NCAPGP2-201ENST00000557911 754 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AC015917.1-201ENST00000579654 510 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 SNORA74C-1-201ENST00000580726 201 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 MIR3939-201ENST00000582614 106 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AC010525.2-201ENST00000590920 195 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms